Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ubqln1Q8R317 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ubqln1Q8R317 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.36■□□□□ 0.37
Ubqln1Q8R317 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ubqln1Q8R317 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.36■□□□□ 0.37
Ubqln1Q8R317 Gm27405-201ENSMUST00000184201 112 ntBASIC17.36■□□□□ 0.37
Ubqln1Q8R317 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.36■□□□□ 0.37
Ubqln1Q8R317 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ubqln1Q8R317 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ubqln1Q8R317 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ubqln1Q8R317 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Ubqln1Q8R317 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ubqln1Q8R317 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ubqln1Q8R317 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ubqln1Q8R317 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Ubqln1Q8R317 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ubqln1Q8R317 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ubqln1Q8R317 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ubqln1Q8R317 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ubqln1Q8R317 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ubqln1Q8R317 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ubqln1Q8R317 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ubqln1Q8R317 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.35■□□□□ 0.37
Ubqln1Q8R317 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.35■□□□□ 0.37
Ubqln1Q8R317 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ubqln1Q8R317 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ubqln1Q8R317 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ubqln1Q8R317 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ubqln1Q8R317 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ubqln1Q8R317 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ubqln1Q8R317 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ubqln1Q8R317 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Ubqln1Q8R317 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ubqln1Q8R317 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ubqln1Q8R317 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ubqln1Q8R317 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Ubqln1Q8R317 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.34■□□□□ 0.37
Ubqln1Q8R317 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.34■□□□□ 0.37
Ubqln1Q8R317 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ubqln1Q8R317 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ubqln1Q8R317 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.34■□□□□ 0.37
Ubqln1Q8R317 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Ubqln1Q8R317 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Ubqln1Q8R317 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ubqln1Q8R317 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Ubqln1Q8R317 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ubqln1Q8R317 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ubqln1Q8R317 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.34■□□□□ 0.37
Ubqln1Q8R317 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ubqln1Q8R317 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Ubqln1Q8R317 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ubqln1Q8R317 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ubqln1Q8R317 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ubqln1Q8R317 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.33■□□□□ 0.36
Ubqln1Q8R317 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ubqln1Q8R317 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ubqln1Q8R317 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ubqln1Q8R317 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Ubqln1Q8R317 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Ubqln1Q8R317 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ubqln1Q8R317 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ubqln1Q8R317 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.32■□□□□ 0.36
Ubqln1Q8R317 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.32■□□□□ 0.36
Ubqln1Q8R317 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Ubqln1Q8R317 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ubqln1Q8R317 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ubqln1Q8R317 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ubqln1Q8R317 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ubqln1Q8R317 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ubqln1Q8R317 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ubqln1Q8R317 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.31■□□□□ 0.36
Ubqln1Q8R317 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ubqln1Q8R317 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ubqln1Q8R317 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ubqln1Q8R317 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ubqln1Q8R317 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.31■□□□□ 0.36
Ubqln1Q8R317 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ubqln1Q8R317 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ubqln1Q8R317 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ubqln1Q8R317 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.31■□□□□ 0.36
Ubqln1Q8R317 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ubqln1Q8R317 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ubqln1Q8R317 Gm7290-201ENSMUST00000104990 617 ntBASIC17.3■□□□□ 0.36
Ubqln1Q8R317 Gm12918-201ENSMUST00000120234 636 ntBASIC17.3■□□□□ 0.36
Ubqln1Q8R317 Gm15710-201ENSMUST00000121821 636 ntBASIC17.3■□□□□ 0.36
Ubqln1Q8R317 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Ubqln1Q8R317 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.3■□□□□ 0.36
Ubqln1Q8R317 Gm5075-201ENSMUST00000196916 622 ntBASIC17.3■□□□□ 0.36
Ubqln1Q8R317 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.3■□□□□ 0.36
Ubqln1Q8R317 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.3■□□□□ 0.36
Ubqln1Q8R317 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ubqln1Q8R317 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ubqln1Q8R317 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ubqln1Q8R317 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Ubqln1Q8R317 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ubqln1Q8R317 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ubqln1Q8R317 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ubqln1Q8R317 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Ubqln1Q8R317 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ubqln1Q8R317 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms