Protein–RNA interactions for Protein: Q8R2E1

Vmn1r38, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r38Q8R2E1 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
Vmn1r38Q8R2E1 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Vmn1r38Q8R2E1 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vmn1r38Q8R2E1 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vmn1r38Q8R2E1 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vmn1r38Q8R2E1 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vmn1r38Q8R2E1 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vmn1r38Q8R2E1 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vmn1r38Q8R2E1 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Vmn1r38Q8R2E1 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vmn1r38Q8R2E1 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Vmn1r38Q8R2E1 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vmn1r38Q8R2E1 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vmn1r38Q8R2E1 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vmn1r38Q8R2E1 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vmn1r38Q8R2E1 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.19■□□□□ 0.34
Vmn1r38Q8R2E1 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vmn1r38Q8R2E1 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vmn1r38Q8R2E1 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vmn1r38Q8R2E1 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Vmn1r38Q8R2E1 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Vmn1r38Q8R2E1 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vmn1r38Q8R2E1 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vmn1r38Q8R2E1 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Vmn1r38Q8R2E1 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vmn1r38Q8R2E1 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.18■□□□□ 0.34
Vmn1r38Q8R2E1 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Vmn1r38Q8R2E1 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.18■□□□□ 0.34
Vmn1r38Q8R2E1 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vmn1r38Q8R2E1 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vmn1r38Q8R2E1 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Vmn1r38Q8R2E1 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.18■□□□□ 0.34
Vmn1r38Q8R2E1 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Vmn1r38Q8R2E1 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Vmn1r38Q8R2E1 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vmn1r38Q8R2E1 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vmn1r38Q8R2E1 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Vmn1r38Q8R2E1 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Vmn1r38Q8R2E1 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vmn1r38Q8R2E1 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vmn1r38Q8R2E1 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Vmn1r38Q8R2E1 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Vmn1r38Q8R2E1 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.17■□□□□ 0.34
Vmn1r38Q8R2E1 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.17■□□□□ 0.34
Vmn1r38Q8R2E1 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.17■□□□□ 0.34
Vmn1r38Q8R2E1 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.17■□□□□ 0.34
Vmn1r38Q8R2E1 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vmn1r38Q8R2E1 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vmn1r38Q8R2E1 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Vmn1r38Q8R2E1 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vmn1r38Q8R2E1 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vmn1r38Q8R2E1 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vmn1r38Q8R2E1 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Vmn1r38Q8R2E1 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vmn1r38Q8R2E1 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vmn1r38Q8R2E1 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Vmn1r38Q8R2E1 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vmn1r38Q8R2E1 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vmn1r38Q8R2E1 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vmn1r38Q8R2E1 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vmn1r38Q8R2E1 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.16■□□□□ 0.34
Vmn1r38Q8R2E1 Gm26833-201ENSMUST00000180899 440 ntBASIC17.16■□□□□ 0.34
Vmn1r38Q8R2E1 Gm27454-201ENSMUST00000185090 204 ntBASIC17.16■□□□□ 0.34
Vmn1r38Q8R2E1 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Vmn1r38Q8R2E1 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vmn1r38Q8R2E1 Gm6139-201ENSMUST00000079261 882 ntBASIC17.16■□□□□ 0.34
Vmn1r38Q8R2E1 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Vmn1r38Q8R2E1 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vmn1r38Q8R2E1 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
Vmn1r38Q8R2E1 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vmn1r38Q8R2E1 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vmn1r38Q8R2E1 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Vmn1r38Q8R2E1 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vmn1r38Q8R2E1 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.15■□□□□ 0.34
Vmn1r38Q8R2E1 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vmn1r38Q8R2E1 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Vmn1r38Q8R2E1 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Vmn1r38Q8R2E1 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vmn1r38Q8R2E1 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Vmn1r38Q8R2E1 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vmn1r38Q8R2E1 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vmn1r38Q8R2E1 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vmn1r38Q8R2E1 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vmn1r38Q8R2E1 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Vmn1r38Q8R2E1 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
Vmn1r38Q8R2E1 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.14■□□□□ 0.33
Vmn1r38Q8R2E1 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Vmn1r38Q8R2E1 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Vmn1r38Q8R2E1 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vmn1r38Q8R2E1 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Vmn1r38Q8R2E1 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Vmn1r38Q8R2E1 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vmn1r38Q8R2E1 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.14■□□□□ 0.33
Vmn1r38Q8R2E1 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.14■□□□□ 0.33
Vmn1r38Q8R2E1 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
Vmn1r38Q8R2E1 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vmn1r38Q8R2E1 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vmn1r38Q8R2E1 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Vmn1r38Q8R2E1 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Vmn1r38Q8R2E1 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms