Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nudcd3Q8R1N4 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nudcd3Q8R1N4 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nudcd3Q8R1N4 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nudcd3Q8R1N4 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nudcd3Q8R1N4 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nudcd3Q8R1N4 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nudcd3Q8R1N4 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nudcd3Q8R1N4 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC18.32■□□□□ 0.52
Nudcd3Q8R1N4 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Nudcd3Q8R1N4 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.32■□□□□ 0.52
Nudcd3Q8R1N4 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Nudcd3Q8R1N4 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nudcd3Q8R1N4 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nudcd3Q8R1N4 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nudcd3Q8R1N4 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nudcd3Q8R1N4 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nudcd3Q8R1N4 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nudcd3Q8R1N4 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nudcd3Q8R1N4 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Nudcd3Q8R1N4 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.31■□□□□ 0.52
Nudcd3Q8R1N4 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nudcd3Q8R1N4 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nudcd3Q8R1N4 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Nudcd3Q8R1N4 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nudcd3Q8R1N4 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nudcd3Q8R1N4 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nudcd3Q8R1N4 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nudcd3Q8R1N4 Gm12251-201ENSMUST00000117893 792 ntBASIC18.31■□□□□ 0.52
Nudcd3Q8R1N4 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Nudcd3Q8R1N4 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.31■□□□□ 0.52
Nudcd3Q8R1N4 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nudcd3Q8R1N4 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.31■□□□□ 0.52
Nudcd3Q8R1N4 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nudcd3Q8R1N4 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nudcd3Q8R1N4 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Nudcd3Q8R1N4 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nudcd3Q8R1N4 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nudcd3Q8R1N4 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
Nudcd3Q8R1N4 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nudcd3Q8R1N4 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nudcd3Q8R1N4 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nudcd3Q8R1N4 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nudcd3Q8R1N4 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nudcd3Q8R1N4 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nudcd3Q8R1N4 Fst-202ENSMUST00000223640 2612 ntBASIC18.3■□□□□ 0.52
Nudcd3Q8R1N4 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nudcd3Q8R1N4 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nudcd3Q8R1N4 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.3■□□□□ 0.52
Nudcd3Q8R1N4 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.3■□□□□ 0.52
Nudcd3Q8R1N4 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Nudcd3Q8R1N4 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nudcd3Q8R1N4 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nudcd3Q8R1N4 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nudcd3Q8R1N4 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nudcd3Q8R1N4 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.3■□□□□ 0.52
Nudcd3Q8R1N4 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nudcd3Q8R1N4 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nudcd3Q8R1N4 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nudcd3Q8R1N4 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Nudcd3Q8R1N4 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nudcd3Q8R1N4 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nudcd3Q8R1N4 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nudcd3Q8R1N4 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nudcd3Q8R1N4 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.29■□□□□ 0.52
Nudcd3Q8R1N4 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.29■□□□□ 0.52
Nudcd3Q8R1N4 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.29■□□□□ 0.52
Nudcd3Q8R1N4 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.29■□□□□ 0.52
Nudcd3Q8R1N4 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nudcd3Q8R1N4 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nudcd3Q8R1N4 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Nudcd3Q8R1N4 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nudcd3Q8R1N4 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nudcd3Q8R1N4 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nudcd3Q8R1N4 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nudcd3Q8R1N4 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Nudcd3Q8R1N4 Gm11421-201ENSMUST00000122124 294 ntBASIC18.28■□□□□ 0.52
Nudcd3Q8R1N4 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Nudcd3Q8R1N4 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Nudcd3Q8R1N4 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nudcd3Q8R1N4 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nudcd3Q8R1N4 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Nudcd3Q8R1N4 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nudcd3Q8R1N4 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nudcd3Q8R1N4 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
Nudcd3Q8R1N4 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nudcd3Q8R1N4 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nudcd3Q8R1N4 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.27■□□□□ 0.52
Nudcd3Q8R1N4 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Nudcd3Q8R1N4 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.27■□□□□ 0.52
Nudcd3Q8R1N4 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nudcd3Q8R1N4 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nudcd3Q8R1N4 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Nudcd3Q8R1N4 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nudcd3Q8R1N4 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nudcd3Q8R1N4 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Nudcd3Q8R1N4 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nudcd3Q8R1N4 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Nudcd3Q8R1N4 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Nudcd3Q8R1N4 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms