Protein–RNA interactions for Protein: Q8R1G6

Pdlim2, PDZ and LIM domain protein 2, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim2Q8R1G6 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pdlim2Q8R1G6 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Pdlim2Q8R1G6 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.13■□□□□ 0.97
Pdlim2Q8R1G6 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.13■□□□□ 0.97
Pdlim2Q8R1G6 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Pdlim2Q8R1G6 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.13■□□□□ 0.97
Pdlim2Q8R1G6 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Pdlim2Q8R1G6 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pdlim2Q8R1G6 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Pdlim2Q8R1G6 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pdlim2Q8R1G6 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pdlim2Q8R1G6 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pdlim2Q8R1G6 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pdlim2Q8R1G6 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pdlim2Q8R1G6 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC21.12■□□□□ 0.97
Pdlim2Q8R1G6 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.12■□□□□ 0.97
Pdlim2Q8R1G6 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pdlim2Q8R1G6 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pdlim2Q8R1G6 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pdlim2Q8R1G6 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Pdlim2Q8R1G6 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pdlim2Q8R1G6 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pdlim2Q8R1G6 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pdlim2Q8R1G6 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pdlim2Q8R1G6 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
Pdlim2Q8R1G6 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Pdlim2Q8R1G6 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Pdlim2Q8R1G6 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pdlim2Q8R1G6 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pdlim2Q8R1G6 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pdlim2Q8R1G6 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pdlim2Q8R1G6 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pdlim2Q8R1G6 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Pdlim2Q8R1G6 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pdlim2Q8R1G6 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC21.1■□□□□ 0.97
Pdlim2Q8R1G6 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pdlim2Q8R1G6 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Pdlim2Q8R1G6 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC21.1■□□□□ 0.97
Pdlim2Q8R1G6 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pdlim2Q8R1G6 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pdlim2Q8R1G6 Gm37805-201ENSMUST00000192612 1094 ntBASIC21.1■□□□□ 0.97
Pdlim2Q8R1G6 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pdlim2Q8R1G6 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pdlim2Q8R1G6 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pdlim2Q8R1G6 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Pdlim2Q8R1G6 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.09■□□□□ 0.97
Pdlim2Q8R1G6 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Pdlim2Q8R1G6 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pdlim2Q8R1G6 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pdlim2Q8R1G6 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pdlim2Q8R1G6 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pdlim2Q8R1G6 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Pdlim2Q8R1G6 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC21.08■□□□□ 0.97
Pdlim2Q8R1G6 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pdlim2Q8R1G6 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC21.08■□□□□ 0.97
Pdlim2Q8R1G6 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pdlim2Q8R1G6 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pdlim2Q8R1G6 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pdlim2Q8R1G6 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pdlim2Q8R1G6 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Pdlim2Q8R1G6 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pdlim2Q8R1G6 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC21.07■□□□□ 0.96
Pdlim2Q8R1G6 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pdlim2Q8R1G6 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Pdlim2Q8R1G6 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pdlim2Q8R1G6 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC21.07■□□□□ 0.96
Pdlim2Q8R1G6 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pdlim2Q8R1G6 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pdlim2Q8R1G6 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pdlim2Q8R1G6 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pdlim2Q8R1G6 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pdlim2Q8R1G6 Gm37374-201ENSMUST00000194954 1829 ntBASIC21.06■□□□□ 0.96
Pdlim2Q8R1G6 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pdlim2Q8R1G6 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC21.06■□□□□ 0.96
Pdlim2Q8R1G6 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.06■□□□□ 0.96
Pdlim2Q8R1G6 Gm13216-201ENSMUST00000117145 591 ntBASIC21.06■□□□□ 0.96
Pdlim2Q8R1G6 Gm10232-201ENSMUST00000089221 720 ntBASIC21.06■□□□□ 0.96
Pdlim2Q8R1G6 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pdlim2Q8R1G6 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pdlim2Q8R1G6 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Pdlim2Q8R1G6 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC21.06■□□□□ 0.96
Pdlim2Q8R1G6 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC21.06■□□□□ 0.96
Pdlim2Q8R1G6 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pdlim2Q8R1G6 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pdlim2Q8R1G6 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pdlim2Q8R1G6 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pdlim2Q8R1G6 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pdlim2Q8R1G6 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pdlim2Q8R1G6 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.05■□□□□ 0.96
Pdlim2Q8R1G6 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pdlim2Q8R1G6 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC21.05■□□□□ 0.96
Pdlim2Q8R1G6 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pdlim2Q8R1G6 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pdlim2Q8R1G6 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pdlim2Q8R1G6 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pdlim2Q8R1G6 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Pdlim2Q8R1G6 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pdlim2Q8R1G6 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pdlim2Q8R1G6 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pdlim2Q8R1G6 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 95.1 ms