Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rtn1Q8K0T0 Gm22325-201ENSMUST00000158904 308 ntBASIC21.15■□□□□ 0.98
Rtn1Q8K0T0 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC21.15■□□□□ 0.98
Rtn1Q8K0T0 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rtn1Q8K0T0 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rtn1Q8K0T0 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Rtn1Q8K0T0 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Rtn1Q8K0T0 Gm10602-201ENSMUST00000098239 609 ntBASIC21.15■□□□□ 0.98
Rtn1Q8K0T0 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC21.15■□□□□ 0.98
Rtn1Q8K0T0 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rtn1Q8K0T0 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Rtn1Q8K0T0 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rtn1Q8K0T0 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rtn1Q8K0T0 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Rtn1Q8K0T0 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rtn1Q8K0T0 Gm26524-201ENSMUST00000192339 390 ntBASIC21.14■□□□□ 0.97
Rtn1Q8K0T0 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Rtn1Q8K0T0 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rtn1Q8K0T0 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rtn1Q8K0T0 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Rtn1Q8K0T0 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rtn1Q8K0T0 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Rtn1Q8K0T0 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rtn1Q8K0T0 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rtn1Q8K0T0 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC21.13■□□□□ 0.97
Rtn1Q8K0T0 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rtn1Q8K0T0 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rtn1Q8K0T0 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rtn1Q8K0T0 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rtn1Q8K0T0 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rtn1Q8K0T0 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rtn1Q8K0T0 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rtn1Q8K0T0 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rtn1Q8K0T0 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC21.12■□□□□ 0.97
Rtn1Q8K0T0 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rtn1Q8K0T0 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC21.12■□□□□ 0.97
Rtn1Q8K0T0 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rtn1Q8K0T0 Gm38308-201ENSMUST00000194934 1809 ntBASIC21.12■□□□□ 0.97
Rtn1Q8K0T0 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rtn1Q8K0T0 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rtn1Q8K0T0 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rtn1Q8K0T0 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
Rtn1Q8K0T0 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC21.11■□□□□ 0.97
Rtn1Q8K0T0 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rtn1Q8K0T0 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rtn1Q8K0T0 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rtn1Q8K0T0 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC21.11■□□□□ 0.97
Rtn1Q8K0T0 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Rtn1Q8K0T0 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rtn1Q8K0T0 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rtn1Q8K0T0 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rtn1Q8K0T0 Dmtn-210ENSMUST00000228824 2377 ntBASIC21.11■□□□□ 0.97
Rtn1Q8K0T0 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rtn1Q8K0T0 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rtn1Q8K0T0 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC21.1■□□□□ 0.97
Rtn1Q8K0T0 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rtn1Q8K0T0 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rtn1Q8K0T0 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rtn1Q8K0T0 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rtn1Q8K0T0 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rtn1Q8K0T0 Gm5408-201ENSMUST00000197998 747 ntBASIC21.1■□□□□ 0.97
Rtn1Q8K0T0 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Rtn1Q8K0T0 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Rtn1Q8K0T0 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rtn1Q8K0T0 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rtn1Q8K0T0 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Rtn1Q8K0T0 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rtn1Q8K0T0 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rtn1Q8K0T0 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rtn1Q8K0T0 Gm43859-201ENSMUST00000200075 1412 ntBASIC21.1■□□□□ 0.97
Rtn1Q8K0T0 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rtn1Q8K0T0 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
Rtn1Q8K0T0 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
Rtn1Q8K0T0 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC21.09■□□□□ 0.97
Rtn1Q8K0T0 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rtn1Q8K0T0 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Rtn1Q8K0T0 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rtn1Q8K0T0 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rtn1Q8K0T0 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rtn1Q8K0T0 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rtn1Q8K0T0 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC21.09■□□□□ 0.97
Rtn1Q8K0T0 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC21.09■□□□□ 0.97
Rtn1Q8K0T0 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Rtn1Q8K0T0 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rtn1Q8K0T0 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rtn1Q8K0T0 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rtn1Q8K0T0 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rtn1Q8K0T0 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rtn1Q8K0T0 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rtn1Q8K0T0 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rtn1Q8K0T0 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC21.08■□□□□ 0.97
Rtn1Q8K0T0 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rtn1Q8K0T0 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rtn1Q8K0T0 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.96
Rtn1Q8K0T0 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Rtn1Q8K0T0 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Rtn1Q8K0T0 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Rtn1Q8K0T0 AC121961.1-201ENSMUST00000218594 1779 ntBASIC21.08■□□□□ 0.96
Rtn1Q8K0T0 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Rtn1Q8K0T0 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms