Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Rdh1Q8CGV4 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.81■□□□□ 0.44
Rdh1Q8CGV4 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rdh1Q8CGV4 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Rdh1Q8CGV4 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rdh1Q8CGV4 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rdh1Q8CGV4 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rdh1Q8CGV4 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Rdh1Q8CGV4 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Rdh1Q8CGV4 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.8■□□□□ 0.44
Rdh1Q8CGV4 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.8■□□□□ 0.44
Rdh1Q8CGV4 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Rdh1Q8CGV4 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Rdh1Q8CGV4 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rdh1Q8CGV4 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rdh1Q8CGV4 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Rdh1Q8CGV4 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rdh1Q8CGV4 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rdh1Q8CGV4 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rdh1Q8CGV4 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rdh1Q8CGV4 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rdh1Q8CGV4 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rdh1Q8CGV4 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.79■□□□□ 0.44
Rdh1Q8CGV4 Gm10698-201ENSMUST00000182663 604 ntBASIC17.79■□□□□ 0.44
Rdh1Q8CGV4 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.79■□□□□ 0.44
Rdh1Q8CGV4 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
Rdh1Q8CGV4 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.79■□□□□ 0.44
Rdh1Q8CGV4 Gm10252-201ENSMUST00000209541 832 ntBASIC17.79■□□□□ 0.44
Rdh1Q8CGV4 Zfp783-201ENSMUST00000095946 670 ntBASIC17.79■□□□□ 0.44
Rdh1Q8CGV4 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rdh1Q8CGV4 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rdh1Q8CGV4 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.79■□□□□ 0.44
Rdh1Q8CGV4 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rdh1Q8CGV4 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rdh1Q8CGV4 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rdh1Q8CGV4 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Rdh1Q8CGV4 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rdh1Q8CGV4 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.78■□□□□ 0.44
Rdh1Q8CGV4 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rdh1Q8CGV4 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.78■□□□□ 0.44
Rdh1Q8CGV4 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rdh1Q8CGV4 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rdh1Q8CGV4 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rdh1Q8CGV4 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rdh1Q8CGV4 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Rdh1Q8CGV4 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rdh1Q8CGV4 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rdh1Q8CGV4 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Rdh1Q8CGV4 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rdh1Q8CGV4 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rdh1Q8CGV4 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.77■□□□□ 0.44
Rdh1Q8CGV4 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Rdh1Q8CGV4 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Rdh1Q8CGV4 Mtag2-201ENSMUST00000058665 714 ntBASIC17.77■□□□□ 0.44
Rdh1Q8CGV4 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rdh1Q8CGV4 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rdh1Q8CGV4 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rdh1Q8CGV4 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
Rdh1Q8CGV4 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rdh1Q8CGV4 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rdh1Q8CGV4 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Rdh1Q8CGV4 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rdh1Q8CGV4 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rdh1Q8CGV4 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rdh1Q8CGV4 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rdh1Q8CGV4 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Rdh1Q8CGV4 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rdh1Q8CGV4 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rdh1Q8CGV4 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Rdh1Q8CGV4 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.76■□□□□ 0.43
Rdh1Q8CGV4 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.76■□□□□ 0.43
Rdh1Q8CGV4 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rdh1Q8CGV4 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rdh1Q8CGV4 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Rdh1Q8CGV4 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rdh1Q8CGV4 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rdh1Q8CGV4 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rdh1Q8CGV4 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rdh1Q8CGV4 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rdh1Q8CGV4 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Rdh1Q8CGV4 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Rdh1Q8CGV4 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rdh1Q8CGV4 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Rdh1Q8CGV4 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Rdh1Q8CGV4 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rdh1Q8CGV4 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rdh1Q8CGV4 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rdh1Q8CGV4 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rdh1Q8CGV4 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rdh1Q8CGV4 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.75■□□□□ 0.43
Rdh1Q8CGV4 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.75■□□□□ 0.43
Rdh1Q8CGV4 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rdh1Q8CGV4 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rdh1Q8CGV4 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rdh1Q8CGV4 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.75■□□□□ 0.43
Rdh1Q8CGV4 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rdh1Q8CGV4 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.75■□□□□ 0.43
Rdh1Q8CGV4 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rdh1Q8CGV4 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rdh1Q8CGV4 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms