Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ShfQ8CG80 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ShfQ8CG80 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ShfQ8CG80 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
ShfQ8CG80 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
ShfQ8CG80 Gm13534-201ENSMUST00000121169 513 ntBASIC16.36■□□□□ 0.21
ShfQ8CG80 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ShfQ8CG80 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ShfQ8CG80 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
ShfQ8CG80 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
ShfQ8CG80 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
ShfQ8CG80 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
ShfQ8CG80 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
ShfQ8CG80 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ShfQ8CG80 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ShfQ8CG80 Tgds-204ENSMUST00000228543 1594 ntBASIC16.35■□□□□ 0.21
ShfQ8CG80 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ShfQ8CG80 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ShfQ8CG80 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
ShfQ8CG80 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ShfQ8CG80 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
ShfQ8CG80 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ShfQ8CG80 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
ShfQ8CG80 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
ShfQ8CG80 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
ShfQ8CG80 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ShfQ8CG80 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.35■□□□□ 0.21
ShfQ8CG80 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ShfQ8CG80 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ShfQ8CG80 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.34■□□□□ 0.21
ShfQ8CG80 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ShfQ8CG80 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ShfQ8CG80 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
ShfQ8CG80 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ShfQ8CG80 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
ShfQ8CG80 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
ShfQ8CG80 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
ShfQ8CG80 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ShfQ8CG80 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ShfQ8CG80 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.34■□□□□ 0.21
ShfQ8CG80 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ShfQ8CG80 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
ShfQ8CG80 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ShfQ8CG80 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ShfQ8CG80 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ShfQ8CG80 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
ShfQ8CG80 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ShfQ8CG80 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
ShfQ8CG80 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
ShfQ8CG80 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ShfQ8CG80 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
ShfQ8CG80 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
ShfQ8CG80 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
ShfQ8CG80 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ShfQ8CG80 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ShfQ8CG80 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
ShfQ8CG80 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
ShfQ8CG80 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ShfQ8CG80 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ShfQ8CG80 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ShfQ8CG80 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
ShfQ8CG80 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
ShfQ8CG80 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
ShfQ8CG80 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ShfQ8CG80 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ShfQ8CG80 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ShfQ8CG80 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ShfQ8CG80 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ShfQ8CG80 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ShfQ8CG80 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ShfQ8CG80 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ShfQ8CG80 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ShfQ8CG80 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ShfQ8CG80 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.32■□□□□ 0.2
ShfQ8CG80 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ShfQ8CG80 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ShfQ8CG80 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ShfQ8CG80 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ShfQ8CG80 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.32■□□□□ 0.2
ShfQ8CG80 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.32■□□□□ 0.2
ShfQ8CG80 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ShfQ8CG80 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC16.32■□□□□ 0.2
ShfQ8CG80 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ShfQ8CG80 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ShfQ8CG80 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
ShfQ8CG80 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ShfQ8CG80 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
ShfQ8CG80 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ShfQ8CG80 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ShfQ8CG80 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.31■□□□□ 0.2
ShfQ8CG80 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ShfQ8CG80 Reep4-203ENSMUST00000226563 1444 ntBASIC16.31■□□□□ 0.2
ShfQ8CG80 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ShfQ8CG80 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ShfQ8CG80 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.31■□□□□ 0.2
ShfQ8CG80 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.31■□□□□ 0.2
ShfQ8CG80 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ShfQ8CG80 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.31■□□□□ 0.2
ShfQ8CG80 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ShfQ8CG80 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms