Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.7■□□□□ 0.42
Cfap54Q8C6S9 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cfap54Q8C6S9 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Cfap54Q8C6S9 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cfap54Q8C6S9 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cfap54Q8C6S9 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Cfap54Q8C6S9 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cfap54Q8C6S9 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Cfap54Q8C6S9 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cfap54Q8C6S9 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cfap54Q8C6S9 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cfap54Q8C6S9 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cfap54Q8C6S9 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cfap54Q8C6S9 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.69■□□□□ 0.42
Cfap54Q8C6S9 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cfap54Q8C6S9 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cfap54Q8C6S9 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cfap54Q8C6S9 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cfap54Q8C6S9 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cfap54Q8C6S9 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cfap54Q8C6S9 Gm7284-201ENSMUST00000131667 944 ntBASIC17.69■□□□□ 0.42
Cfap54Q8C6S9 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cfap54Q8C6S9 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Cfap54Q8C6S9 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.69■□□□□ 0.42
Cfap54Q8C6S9 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cfap54Q8C6S9 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cfap54Q8C6S9 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cfap54Q8C6S9 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cfap54Q8C6S9 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Cfap54Q8C6S9 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Cfap54Q8C6S9 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cfap54Q8C6S9 Gm18101-201ENSMUST00000215769 548 ntBASIC17.68■□□□□ 0.42
Cfap54Q8C6S9 Flg-201ENSMUST00000050758 1488 ntBASIC17.68■□□□□ 0.42
Cfap54Q8C6S9 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cfap54Q8C6S9 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cfap54Q8C6S9 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.68■□□□□ 0.42
Cfap54Q8C6S9 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cfap54Q8C6S9 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cfap54Q8C6S9 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cfap54Q8C6S9 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.67■□□□□ 0.42
Cfap54Q8C6S9 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cfap54Q8C6S9 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cfap54Q8C6S9 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cfap54Q8C6S9 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cfap54Q8C6S9 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cfap54Q8C6S9 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.67■□□□□ 0.42
Cfap54Q8C6S9 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cfap54Q8C6S9 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cfap54Q8C6S9 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cfap54Q8C6S9 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cfap54Q8C6S9 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.67■□□□□ 0.42
Cfap54Q8C6S9 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Cfap54Q8C6S9 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cfap54Q8C6S9 Gm18032-201ENSMUST00000222541 538 ntBASIC17.67■□□□□ 0.42
Cfap54Q8C6S9 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cfap54Q8C6S9 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cfap54Q8C6S9 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cfap54Q8C6S9 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.66■□□□□ 0.42
Cfap54Q8C6S9 Gm15375-201ENSMUST00000119510 849 ntBASIC17.66■□□□□ 0.42
Cfap54Q8C6S9 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Cfap54Q8C6S9 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cfap54Q8C6S9 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cfap54Q8C6S9 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cfap54Q8C6S9 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.66■□□□□ 0.42
Cfap54Q8C6S9 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cfap54Q8C6S9 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cfap54Q8C6S9 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cfap54Q8C6S9 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.66■□□□□ 0.42
Cfap54Q8C6S9 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cfap54Q8C6S9 Gm43183-201ENSMUST00000200632 547 ntBASIC17.65■□□□□ 0.42
Cfap54Q8C6S9 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cfap54Q8C6S9 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.65■□□□□ 0.42
Cfap54Q8C6S9 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.65■□□□□ 0.42
Cfap54Q8C6S9 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cfap54Q8C6S9 Gm7461-201ENSMUST00000058918 827 ntBASIC17.65■□□□□ 0.42
Cfap54Q8C6S9 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.65■□□□□ 0.42
Cfap54Q8C6S9 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Cfap54Q8C6S9 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cfap54Q8C6S9 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cfap54Q8C6S9 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cfap54Q8C6S9 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.65■□□□□ 0.42
Cfap54Q8C6S9 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.65■□□□□ 0.42
Cfap54Q8C6S9 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.65■□□□□ 0.42
Cfap54Q8C6S9 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cfap54Q8C6S9 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cfap54Q8C6S9 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cfap54Q8C6S9 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Cfap54Q8C6S9 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cfap54Q8C6S9 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cfap54Q8C6S9 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cfap54Q8C6S9 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cfap54Q8C6S9 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cfap54Q8C6S9 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cfap54Q8C6S9 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cfap54Q8C6S9 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cfap54Q8C6S9 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Cfap54Q8C6S9 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cfap54Q8C6S9 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Cfap54Q8C6S9 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Cfap54Q8C6S9 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms