Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC22.6■■□□□ 1.21
Ptcd1Q8C2E4 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Ptcd1Q8C2E4 Gm19094-201ENSMUST00000209791 1246 ntBASIC22.6■■□□□ 1.21
Ptcd1Q8C2E4 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ptcd1Q8C2E4 AC160393.1-201ENSMUST00000218378 1279 ntBASIC22.6■■□□□ 1.21
Ptcd1Q8C2E4 Gm30025-201ENSMUST00000218555 728 ntBASIC22.6■■□□□ 1.21
Ptcd1Q8C2E4 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
Ptcd1Q8C2E4 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC22.6■■□□□ 1.21
Ptcd1Q8C2E4 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Ptcd1Q8C2E4 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ptcd1Q8C2E4 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ptcd1Q8C2E4 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ptcd1Q8C2E4 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ptcd1Q8C2E4 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC22.59■■□□□ 1.21
Ptcd1Q8C2E4 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC22.59■■□□□ 1.21
Ptcd1Q8C2E4 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ptcd1Q8C2E4 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ptcd1Q8C2E4 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ptcd1Q8C2E4 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ptcd1Q8C2E4 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC22.58■■□□□ 1.21
Ptcd1Q8C2E4 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ptcd1Q8C2E4 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Ptcd1Q8C2E4 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC22.58■■□□□ 1.2
Ptcd1Q8C2E4 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.2
Ptcd1Q8C2E4 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Ptcd1Q8C2E4 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.2
Ptcd1Q8C2E4 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ptcd1Q8C2E4 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Ptcd1Q8C2E4 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC22.57■■□□□ 1.2
Ptcd1Q8C2E4 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Ptcd1Q8C2E4 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Ptcd1Q8C2E4 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ptcd1Q8C2E4 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ptcd1Q8C2E4 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
Ptcd1Q8C2E4 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC22.56■■□□□ 1.2
Ptcd1Q8C2E4 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ptcd1Q8C2E4 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
Ptcd1Q8C2E4 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
Ptcd1Q8C2E4 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Ptcd1Q8C2E4 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Ptcd1Q8C2E4 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ptcd1Q8C2E4 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ptcd1Q8C2E4 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ptcd1Q8C2E4 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ptcd1Q8C2E4 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Ptcd1Q8C2E4 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ptcd1Q8C2E4 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Ptcd1Q8C2E4 Wnt10b-205ENSMUST00000226846 1204 ntBASIC22.55■■□□□ 1.2
Ptcd1Q8C2E4 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ptcd1Q8C2E4 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ptcd1Q8C2E4 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC22.55■■□□□ 1.2
Ptcd1Q8C2E4 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ptcd1Q8C2E4 Iqck-206ENSMUST00000208658 2891 ntBASIC22.55■■□□□ 1.2
Ptcd1Q8C2E4 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ptcd1Q8C2E4 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Ptcd1Q8C2E4 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Ptcd1Q8C2E4 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ptcd1Q8C2E4 Gm5540-201ENSMUST00000131852 1848 ntBASIC22.54■■□□□ 1.2
Ptcd1Q8C2E4 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ptcd1Q8C2E4 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ptcd1Q8C2E4 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ptcd1Q8C2E4 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ptcd1Q8C2E4 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ptcd1Q8C2E4 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ptcd1Q8C2E4 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ptcd1Q8C2E4 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ptcd1Q8C2E4 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ptcd1Q8C2E4 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Ptcd1Q8C2E4 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
Ptcd1Q8C2E4 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ptcd1Q8C2E4 Gm18688-201ENSMUST00000204695 1859 ntBASIC22.54■■□□□ 1.2
Ptcd1Q8C2E4 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ptcd1Q8C2E4 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
Ptcd1Q8C2E4 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC22.53■■□□□ 1.2
Ptcd1Q8C2E4 Arhgef4-208ENSMUST00000211073 171 ntBASIC22.53■■□□□ 1.2
Ptcd1Q8C2E4 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Ptcd1Q8C2E4 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ptcd1Q8C2E4 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Ptcd1Q8C2E4 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ptcd1Q8C2E4 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ptcd1Q8C2E4 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ptcd1Q8C2E4 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ptcd1Q8C2E4 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC22.52■■□□□ 1.2
Ptcd1Q8C2E4 Gm21814-202ENSMUST00000203277 873 ntBASIC22.52■■□□□ 1.2
Ptcd1Q8C2E4 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ptcd1Q8C2E4 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ptcd1Q8C2E4 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ptcd1Q8C2E4 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
Ptcd1Q8C2E4 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC22.52■■□□□ 1.19
Ptcd1Q8C2E4 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Ptcd1Q8C2E4 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Ptcd1Q8C2E4 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ptcd1Q8C2E4 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC22.51■■□□□ 1.19
Ptcd1Q8C2E4 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC22.51■■□□□ 1.19
Ptcd1Q8C2E4 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ptcd1Q8C2E4 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ptcd1Q8C2E4 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ptcd1Q8C2E4 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
Ptcd1Q8C2E4 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC22.5■■□□□ 1.19
Ptcd1Q8C2E4 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms