Protein–RNA interactions for Protein: Q8C166

Cpne1, Copine-1, mousemouse

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne1Q8C166 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.13■□□□□ 0.33
Cpne1Q8C166 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cpne1Q8C166 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cpne1Q8C166 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cpne1Q8C166 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cpne1Q8C166 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Cpne1Q8C166 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.13■□□□□ 0.33
Cpne1Q8C166 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.13■□□□□ 0.33
Cpne1Q8C166 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cpne1Q8C166 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Cpne1Q8C166 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cpne1Q8C166 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cpne1Q8C166 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Cpne1Q8C166 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpne1Q8C166 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.12■□□□□ 0.33
Cpne1Q8C166 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpne1Q8C166 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cpne1Q8C166 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cpne1Q8C166 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpne1Q8C166 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpne1Q8C166 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cpne1Q8C166 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpne1Q8C166 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.12■□□□□ 0.33
Cpne1Q8C166 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpne1Q8C166 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpne1Q8C166 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpne1Q8C166 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpne1Q8C166 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpne1Q8C166 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpne1Q8C166 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpne1Q8C166 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpne1Q8C166 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpne1Q8C166 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpne1Q8C166 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpne1Q8C166 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpne1Q8C166 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpne1Q8C166 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpne1Q8C166 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.11■□□□□ 0.33
Cpne1Q8C166 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.11■□□□□ 0.33
Cpne1Q8C166 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpne1Q8C166 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpne1Q8C166 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpne1Q8C166 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpne1Q8C166 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpne1Q8C166 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpne1Q8C166 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpne1Q8C166 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpne1Q8C166 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpne1Q8C166 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpne1Q8C166 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpne1Q8C166 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpne1Q8C166 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpne1Q8C166 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Cpne1Q8C166 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpne1Q8C166 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cpne1Q8C166 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpne1Q8C166 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpne1Q8C166 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Cpne1Q8C166 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.1■□□□□ 0.33
Cpne1Q8C166 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpne1Q8C166 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Cpne1Q8C166 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpne1Q8C166 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cpne1Q8C166 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cpne1Q8C166 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cpne1Q8C166 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cpne1Q8C166 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cpne1Q8C166 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Cpne1Q8C166 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Cpne1Q8C166 Gm7290-201ENSMUST00000104990 617 ntBASIC17.09■□□□□ 0.33
Cpne1Q8C166 Gm12918-201ENSMUST00000120234 636 ntBASIC17.09■□□□□ 0.33
Cpne1Q8C166 Gm15710-201ENSMUST00000121821 636 ntBASIC17.09■□□□□ 0.33
Cpne1Q8C166 Mir5133-201ENSMUST00000174955 77 ntBASIC17.09■□□□□ 0.33
Cpne1Q8C166 Gm5075-201ENSMUST00000196916 622 ntBASIC17.09■□□□□ 0.33
Cpne1Q8C166 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cpne1Q8C166 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cpne1Q8C166 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cpne1Q8C166 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.09■□□□□ 0.33
Cpne1Q8C166 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.09■□□□□ 0.33
Cpne1Q8C166 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cpne1Q8C166 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Cpne1Q8C166 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cpne1Q8C166 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cpne1Q8C166 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cpne1Q8C166 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cpne1Q8C166 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cpne1Q8C166 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Cpne1Q8C166 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cpne1Q8C166 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cpne1Q8C166 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
Cpne1Q8C166 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Cpne1Q8C166 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cpne1Q8C166 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.08■□□□□ 0.32
Cpne1Q8C166 Gm12933-201ENSMUST00000120203 872 ntBASIC17.08■□□□□ 0.32
Cpne1Q8C166 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Cpne1Q8C166 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cpne1Q8C166 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.08■□□□□ 0.32
Cpne1Q8C166 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.08■□□□□ 0.32
Cpne1Q8C166 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
Cpne1Q8C166 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms