Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.59■□□□□ 0.57
Sh3rf2Q8BZT2 Mtag2-201ENSMUST00000058665 714 ntBASIC18.59■□□□□ 0.57
Sh3rf2Q8BZT2 Zfp783-201ENSMUST00000095946 670 ntBASIC18.59■□□□□ 0.57
Sh3rf2Q8BZT2 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh3rf2Q8BZT2 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Sh3rf2Q8BZT2 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh3rf2Q8BZT2 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh3rf2Q8BZT2 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh3rf2Q8BZT2 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Sh3rf2Q8BZT2 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sh3rf2Q8BZT2 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sh3rf2Q8BZT2 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Sh3rf2Q8BZT2 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Sh3rf2Q8BZT2 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sh3rf2Q8BZT2 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.58■□□□□ 0.56
Sh3rf2Q8BZT2 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Sh3rf2Q8BZT2 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sh3rf2Q8BZT2 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.58■□□□□ 0.56
Sh3rf2Q8BZT2 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.58■□□□□ 0.56
Sh3rf2Q8BZT2 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sh3rf2Q8BZT2 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sh3rf2Q8BZT2 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sh3rf2Q8BZT2 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Sh3rf2Q8BZT2 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh3rf2Q8BZT2 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh3rf2Q8BZT2 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Sh3rf2Q8BZT2 Mir7071-201ENSMUST00000184847 69 ntBASIC18.57■□□□□ 0.56
Sh3rf2Q8BZT2 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.57■□□□□ 0.56
Sh3rf2Q8BZT2 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh3rf2Q8BZT2 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Sh3rf2Q8BZT2 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh3rf2Q8BZT2 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh3rf2Q8BZT2 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh3rf2Q8BZT2 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3rf2Q8BZT2 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3rf2Q8BZT2 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3rf2Q8BZT2 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3rf2Q8BZT2 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3rf2Q8BZT2 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3rf2Q8BZT2 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3rf2Q8BZT2 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sh3rf2Q8BZT2 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Sh3rf2Q8BZT2 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sh3rf2Q8BZT2 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sh3rf2Q8BZT2 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Sh3rf2Q8BZT2 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sh3rf2Q8BZT2 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Sh3rf2Q8BZT2 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.55■□□□□ 0.56
Sh3rf2Q8BZT2 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.55■□□□□ 0.56
Sh3rf2Q8BZT2 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sh3rf2Q8BZT2 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Sh3rf2Q8BZT2 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sh3rf2Q8BZT2 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3rf2Q8BZT2 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3rf2Q8BZT2 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3rf2Q8BZT2 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.54■□□□□ 0.56
Sh3rf2Q8BZT2 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3rf2Q8BZT2 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3rf2Q8BZT2 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3rf2Q8BZT2 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3rf2Q8BZT2 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3rf2Q8BZT2 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3rf2Q8BZT2 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Sh3rf2Q8BZT2 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3rf2Q8BZT2 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Sh3rf2Q8BZT2 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.53■□□□□ 0.56
Sh3rf2Q8BZT2 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.53■□□□□ 0.56
Sh3rf2Q8BZT2 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3rf2Q8BZT2 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3rf2Q8BZT2 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.53■□□□□ 0.56
Sh3rf2Q8BZT2 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.53■□□□□ 0.56
Sh3rf2Q8BZT2 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3rf2Q8BZT2 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3rf2Q8BZT2 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3rf2Q8BZT2 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.53■□□□□ 0.56
Sh3rf2Q8BZT2 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3rf2Q8BZT2 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3rf2Q8BZT2 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.53■□□□□ 0.56
Sh3rf2Q8BZT2 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3rf2Q8BZT2 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Sh3rf2Q8BZT2 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3rf2Q8BZT2 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3rf2Q8BZT2 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Sh3rf2Q8BZT2 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3rf2Q8BZT2 Gm715-201ENSMUST00000117865 831 ntBASIC18.52■□□□□ 0.56
Sh3rf2Q8BZT2 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.52■□□□□ 0.56
Sh3rf2Q8BZT2 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.52■□□□□ 0.56
Sh3rf2Q8BZT2 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3rf2Q8BZT2 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3rf2Q8BZT2 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sh3rf2Q8BZT2 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sh3rf2Q8BZT2 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sh3rf2Q8BZT2 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sh3rf2Q8BZT2 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3rf2Q8BZT2 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.51■□□□□ 0.55
Sh3rf2Q8BZT2 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.51■□□□□ 0.55
Sh3rf2Q8BZT2 Mir1199-201ENSMUST00000117015 119 ntBASIC18.51■□□□□ 0.55
Sh3rf2Q8BZT2 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.51■□□□□ 0.55
Sh3rf2Q8BZT2 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.51■□□□□ 0.55
Sh3rf2Q8BZT2 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms