Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nup54Q8BTS4 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nup54Q8BTS4 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nup54Q8BTS4 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.78■□□□□ 0.6
Nup54Q8BTS4 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.78■□□□□ 0.6
Nup54Q8BTS4 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Nup54Q8BTS4 Gm2399-201ENSMUST00000104944 225 ntBASIC18.78■□□□□ 0.6
Nup54Q8BTS4 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.78■□□□□ 0.6
Nup54Q8BTS4 Gm12896-201ENSMUST00000118430 226 ntBASIC18.78■□□□□ 0.6
Nup54Q8BTS4 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.78■□□□□ 0.6
Nup54Q8BTS4 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nup54Q8BTS4 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nup54Q8BTS4 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.78■□□□□ 0.6
Nup54Q8BTS4 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nup54Q8BTS4 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.78■□□□□ 0.6
Nup54Q8BTS4 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nup54Q8BTS4 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nup54Q8BTS4 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nup54Q8BTS4 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.77■□□□□ 0.6
Nup54Q8BTS4 Dio3-201ENSMUST00000097228 1449 ntBASIC18.77■□□□□ 0.6
Nup54Q8BTS4 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nup54Q8BTS4 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.77■□□□□ 0.6
Nup54Q8BTS4 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.77■□□□□ 0.6
Nup54Q8BTS4 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.77■□□□□ 0.6
Nup54Q8BTS4 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nup54Q8BTS4 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.77■□□□□ 0.6
Nup54Q8BTS4 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.77■□□□□ 0.6
Nup54Q8BTS4 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.77■□□□□ 0.6
Nup54Q8BTS4 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nup54Q8BTS4 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nup54Q8BTS4 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nup54Q8BTS4 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Nup54Q8BTS4 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nup54Q8BTS4 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nup54Q8BTS4 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nup54Q8BTS4 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nup54Q8BTS4 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nup54Q8BTS4 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Nup54Q8BTS4 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nup54Q8BTS4 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Nup54Q8BTS4 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nup54Q8BTS4 Gm10653-202ENSMUST00000139570 835 ntBASIC18.76■□□□□ 0.59
Nup54Q8BTS4 Gm27011-201ENSMUST00000182352 972 ntBASIC18.76■□□□□ 0.59
Nup54Q8BTS4 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nup54Q8BTS4 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nup54Q8BTS4 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nup54Q8BTS4 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nup54Q8BTS4 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nup54Q8BTS4 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nup54Q8BTS4 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nup54Q8BTS4 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nup54Q8BTS4 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nup54Q8BTS4 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
Nup54Q8BTS4 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nup54Q8BTS4 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.75■□□□□ 0.59
Nup54Q8BTS4 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nup54Q8BTS4 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nup54Q8BTS4 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nup54Q8BTS4 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nup54Q8BTS4 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nup54Q8BTS4 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nup54Q8BTS4 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nup54Q8BTS4 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nup54Q8BTS4 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nup54Q8BTS4 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Nup54Q8BTS4 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nup54Q8BTS4 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nup54Q8BTS4 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Nup54Q8BTS4 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Nup54Q8BTS4 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nup54Q8BTS4 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nup54Q8BTS4 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nup54Q8BTS4 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nup54Q8BTS4 Gm37856-201ENSMUST00000191634 999 ntBASIC18.74■□□□□ 0.59
Nup54Q8BTS4 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nup54Q8BTS4 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nup54Q8BTS4 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nup54Q8BTS4 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nup54Q8BTS4 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nup54Q8BTS4 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nup54Q8BTS4 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nup54Q8BTS4 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nup54Q8BTS4 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nup54Q8BTS4 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nup54Q8BTS4 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Nup54Q8BTS4 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Nup54Q8BTS4 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nup54Q8BTS4 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nup54Q8BTS4 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nup54Q8BTS4 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.73■□□□□ 0.59
Nup54Q8BTS4 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Nup54Q8BTS4 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.73■□□□□ 0.59
Nup54Q8BTS4 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Nup54Q8BTS4 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.73■□□□□ 0.59
Nup54Q8BTS4 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nup54Q8BTS4 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.73■□□□□ 0.59
Nup54Q8BTS4 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nup54Q8BTS4 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nup54Q8BTS4 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.72■□□□□ 0.59
Nup54Q8BTS4 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms