Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Smco3Q8BQM7 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Smco3Q8BQM7 Gm7417-201ENSMUST00000192950 473 ntBASIC15.14■□□□□ 0.01
Smco3Q8BQM7 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC15.14■□□□□ 0.01
Smco3Q8BQM7 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smco3Q8BQM7 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Smco3Q8BQM7 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Smco3Q8BQM7 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smco3Q8BQM7 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Smco3Q8BQM7 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smco3Q8BQM7 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smco3Q8BQM7 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smco3Q8BQM7 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smco3Q8BQM7 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smco3Q8BQM7 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smco3Q8BQM7 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smco3Q8BQM7 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC15.13■□□□□ 0.01
Smco3Q8BQM7 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smco3Q8BQM7 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smco3Q8BQM7 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smco3Q8BQM7 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.13■□□□□ 0.01
Smco3Q8BQM7 Gm15820-201ENSMUST00000201566 728 ntBASIC15.13■□□□□ 0.01
Smco3Q8BQM7 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smco3Q8BQM7 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smco3Q8BQM7 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smco3Q8BQM7 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smco3Q8BQM7 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smco3Q8BQM7 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smco3Q8BQM7 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smco3Q8BQM7 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Smco3Q8BQM7 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smco3Q8BQM7 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smco3Q8BQM7 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smco3Q8BQM7 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.12■□□□□ 0.01
Smco3Q8BQM7 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Smco3Q8BQM7 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smco3Q8BQM7 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.12■□□□□ 0.01
Smco3Q8BQM7 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smco3Q8BQM7 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Smco3Q8BQM7 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smco3Q8BQM7 Gm43759-201ENSMUST00000196925 1261 ntBASIC15.12■□□□□ 0.01
Smco3Q8BQM7 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smco3Q8BQM7 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smco3Q8BQM7 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Smco3Q8BQM7 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smco3Q8BQM7 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Smco3Q8BQM7 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smco3Q8BQM7 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smco3Q8BQM7 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smco3Q8BQM7 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smco3Q8BQM7 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smco3Q8BQM7 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC15.12■□□□□ 0.01
Smco3Q8BQM7 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC15.12■□□□□ 0.01
Smco3Q8BQM7 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.11■□□□□ 0.01
Smco3Q8BQM7 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Smco3Q8BQM7 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smco3Q8BQM7 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smco3Q8BQM7 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smco3Q8BQM7 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smco3Q8BQM7 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Smco3Q8BQM7 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Smco3Q8BQM7 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smco3Q8BQM7 Gm15853-202ENSMUST00000195518 2041 ntBASIC15.11■□□□□ 0.01
Smco3Q8BQM7 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Smco3Q8BQM7 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smco3Q8BQM7 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Smco3Q8BQM7 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smco3Q8BQM7 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smco3Q8BQM7 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smco3Q8BQM7 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smco3Q8BQM7 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smco3Q8BQM7 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.11■□□□□ 0.01
Smco3Q8BQM7 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smco3Q8BQM7 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smco3Q8BQM7 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Smco3Q8BQM7 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smco3Q8BQM7 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smco3Q8BQM7 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smco3Q8BQM7 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Smco3Q8BQM7 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Smco3Q8BQM7 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smco3Q8BQM7 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smco3Q8BQM7 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.1■□□□□ 0.01
Smco3Q8BQM7 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Smco3Q8BQM7 Gm8770-201ENSMUST00000121113 1109 ntBASIC15.1■□□□□ 0.01
Smco3Q8BQM7 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC15.1■□□□□ 0.01
Smco3Q8BQM7 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Smco3Q8BQM7 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smco3Q8BQM7 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smco3Q8BQM7 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smco3Q8BQM7 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smco3Q8BQM7 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smco3Q8BQM7 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smco3Q8BQM7 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Smco3Q8BQM7 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smco3Q8BQM7 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smco3Q8BQM7 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smco3Q8BQM7 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smco3Q8BQM7 AC123834.2-201ENSMUST00000224038 2340 ntBASIC15.09■□□□□ 0.01
Smco3Q8BQM7 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms