Protein–RNA interactions for Protein: Q8BLR2

Cpne4, Copine-4, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne4Q8BLR2 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Cpne4Q8BLR2 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.39■□□□□ 0.21
Cpne4Q8BLR2 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne4Q8BLR2 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Cpne4Q8BLR2 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne4Q8BLR2 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne4Q8BLR2 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Cpne4Q8BLR2 Gm4968-201ENSMUST00000071458 858 ntBASIC16.39■□□□□ 0.21
Cpne4Q8BLR2 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne4Q8BLR2 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne4Q8BLR2 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne4Q8BLR2 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne4Q8BLR2 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.39■□□□□ 0.21
Cpne4Q8BLR2 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne4Q8BLR2 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne4Q8BLR2 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne4Q8BLR2 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.39■□□□□ 0.21
Cpne4Q8BLR2 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne4Q8BLR2 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne4Q8BLR2 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cpne4Q8BLR2 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cpne4Q8BLR2 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cpne4Q8BLR2 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Cpne4Q8BLR2 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cpne4Q8BLR2 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cpne4Q8BLR2 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cpne4Q8BLR2 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cpne4Q8BLR2 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cpne4Q8BLR2 Gm12441-201ENSMUST00000121806 588 ntBASIC16.38■□□□□ 0.21
Cpne4Q8BLR2 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cpne4Q8BLR2 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cpne4Q8BLR2 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cpne4Q8BLR2 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.38■□□□□ 0.21
Cpne4Q8BLR2 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.38■□□□□ 0.21
Cpne4Q8BLR2 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cpne4Q8BLR2 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cpne4Q8BLR2 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cpne4Q8BLR2 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cpne4Q8BLR2 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cpne4Q8BLR2 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.37■□□□□ 0.21
Cpne4Q8BLR2 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cpne4Q8BLR2 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
Cpne4Q8BLR2 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.37■□□□□ 0.21
Cpne4Q8BLR2 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cpne4Q8BLR2 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cpne4Q8BLR2 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cpne4Q8BLR2 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cpne4Q8BLR2 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.37■□□□□ 0.21
Cpne4Q8BLR2 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.37■□□□□ 0.21
Cpne4Q8BLR2 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.37■□□□□ 0.21
Cpne4Q8BLR2 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cpne4Q8BLR2 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cpne4Q8BLR2 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Cpne4Q8BLR2 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cpne4Q8BLR2 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.37■□□□□ 0.21
Cpne4Q8BLR2 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cpne4Q8BLR2 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cpne4Q8BLR2 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Cpne4Q8BLR2 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cpne4Q8BLR2 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cpne4Q8BLR2 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.36■□□□□ 0.21
Cpne4Q8BLR2 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cpne4Q8BLR2 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cpne4Q8BLR2 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.36■□□□□ 0.21
Cpne4Q8BLR2 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.36■□□□□ 0.21
Cpne4Q8BLR2 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Cpne4Q8BLR2 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cpne4Q8BLR2 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cpne4Q8BLR2 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cpne4Q8BLR2 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cpne4Q8BLR2 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cpne4Q8BLR2 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cpne4Q8BLR2 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cpne4Q8BLR2 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cpne4Q8BLR2 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.35■□□□□ 0.21
Cpne4Q8BLR2 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cpne4Q8BLR2 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cpne4Q8BLR2 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Cpne4Q8BLR2 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Cpne4Q8BLR2 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.35■□□□□ 0.21
Cpne4Q8BLR2 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.35■□□□□ 0.21
Cpne4Q8BLR2 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.35■□□□□ 0.21
Cpne4Q8BLR2 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cpne4Q8BLR2 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cpne4Q8BLR2 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Cpne4Q8BLR2 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.35■□□□□ 0.21
Cpne4Q8BLR2 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.35■□□□□ 0.21
Cpne4Q8BLR2 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cpne4Q8BLR2 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cpne4Q8BLR2 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cpne4Q8BLR2 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.34■□□□□ 0.21
Cpne4Q8BLR2 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Cpne4Q8BLR2 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Cpne4Q8BLR2 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
Cpne4Q8BLR2 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cpne4Q8BLR2 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.34■□□□□ 0.21
Cpne4Q8BLR2 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cpne4Q8BLR2 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.34■□□□□ 0.21
Cpne4Q8BLR2 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.34■□□□□ 0.21
Cpne4Q8BLR2 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms