Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp1Q8BJQ2 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp1Q8BJQ2 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp1Q8BJQ2 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Usp1Q8BJQ2 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp1Q8BJQ2 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Usp1Q8BJQ2 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.43■□□□□ 0.7
Usp1Q8BJQ2 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp1Q8BJQ2 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp1Q8BJQ2 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Usp1Q8BJQ2 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp1Q8BJQ2 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp1Q8BJQ2 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Usp1Q8BJQ2 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Usp1Q8BJQ2 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp1Q8BJQ2 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Usp1Q8BJQ2 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Usp1Q8BJQ2 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Usp1Q8BJQ2 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.42■□□□□ 0.7
Usp1Q8BJQ2 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.42■□□□□ 0.7
Usp1Q8BJQ2 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp1Q8BJQ2 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp1Q8BJQ2 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Usp1Q8BJQ2 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp1Q8BJQ2 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Usp1Q8BJQ2 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp1Q8BJQ2 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp1Q8BJQ2 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Usp1Q8BJQ2 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Usp1Q8BJQ2 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp1Q8BJQ2 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp1Q8BJQ2 Mir1199-201ENSMUST00000117015 119 ntBASIC19.41■□□□□ 0.7
Usp1Q8BJQ2 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.41■□□□□ 0.7
Usp1Q8BJQ2 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.41■□□□□ 0.7
Usp1Q8BJQ2 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.41■□□□□ 0.7
Usp1Q8BJQ2 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Usp1Q8BJQ2 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp1Q8BJQ2 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp1Q8BJQ2 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp1Q8BJQ2 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.41■□□□□ 0.7
Usp1Q8BJQ2 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp1Q8BJQ2 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp1Q8BJQ2 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp1Q8BJQ2 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp1Q8BJQ2 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp1Q8BJQ2 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp1Q8BJQ2 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp1Q8BJQ2 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp1Q8BJQ2 Gm13836-201ENSMUST00000121159 501 ntBASIC19.4■□□□□ 0.7
Usp1Q8BJQ2 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp1Q8BJQ2 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.4■□□□□ 0.7
Usp1Q8BJQ2 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Usp1Q8BJQ2 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp1Q8BJQ2 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp1Q8BJQ2 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp1Q8BJQ2 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Usp1Q8BJQ2 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Usp1Q8BJQ2 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp1Q8BJQ2 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Usp1Q8BJQ2 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp1Q8BJQ2 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp1Q8BJQ2 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp1Q8BJQ2 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp1Q8BJQ2 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp1Q8BJQ2 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp1Q8BJQ2 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.38■□□□□ 0.69
Usp1Q8BJQ2 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp1Q8BJQ2 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp1Q8BJQ2 Gm11927-201ENSMUST00000118472 759 ntBASIC19.38■□□□□ 0.69
Usp1Q8BJQ2 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.38■□□□□ 0.69
Usp1Q8BJQ2 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Usp1Q8BJQ2 Gm7977-201ENSMUST00000193787 748 ntBASIC19.38■□□□□ 0.69
Usp1Q8BJQ2 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp1Q8BJQ2 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp1Q8BJQ2 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp1Q8BJQ2 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.38■□□□□ 0.69
Usp1Q8BJQ2 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.37■□□□□ 0.69
Usp1Q8BJQ2 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.37■□□□□ 0.69
Usp1Q8BJQ2 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Usp1Q8BJQ2 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Usp1Q8BJQ2 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Usp1Q8BJQ2 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.37■□□□□ 0.69
Usp1Q8BJQ2 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.37■□□□□ 0.69
Usp1Q8BJQ2 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Usp1Q8BJQ2 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
Usp1Q8BJQ2 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.37■□□□□ 0.69
Usp1Q8BJQ2 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.37■□□□□ 0.69
Usp1Q8BJQ2 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.37■□□□□ 0.69
Usp1Q8BJQ2 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Usp1Q8BJQ2 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Usp1Q8BJQ2 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.37■□□□□ 0.69
Usp1Q8BJQ2 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp1Q8BJQ2 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp1Q8BJQ2 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.37■□□□□ 0.69
Usp1Q8BJQ2 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp1Q8BJQ2 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.36■□□□□ 0.69
Usp1Q8BJQ2 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Usp1Q8BJQ2 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp1Q8BJQ2 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp1Q8BJQ2 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms