Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smarcal1Q8BJL0 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smarcal1Q8BJL0 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.53■□□□□ 0.72
Smarcal1Q8BJL0 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smarcal1Q8BJL0 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.53■□□□□ 0.72
Smarcal1Q8BJL0 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smarcal1Q8BJL0 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Smarcal1Q8BJL0 Golph3-202ENSMUST00000226517 2359 ntBASIC19.53■□□□□ 0.72
Smarcal1Q8BJL0 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Smarcal1Q8BJL0 Mir6349-201ENSMUST00000184059 97 ntBASIC19.53■□□□□ 0.72
Smarcal1Q8BJL0 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smarcal1Q8BJL0 Gm9987-201ENSMUST00000069768 567 ntBASIC19.53■□□□□ 0.72
Smarcal1Q8BJL0 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.53■□□□□ 0.72
Smarcal1Q8BJL0 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smarcal1Q8BJL0 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.53■□□□□ 0.72
Smarcal1Q8BJL0 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smarcal1Q8BJL0 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smarcal1Q8BJL0 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smarcal1Q8BJL0 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smarcal1Q8BJL0 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smarcal1Q8BJL0 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smarcal1Q8BJL0 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
Smarcal1Q8BJL0 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smarcal1Q8BJL0 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.52■□□□□ 0.72
Smarcal1Q8BJL0 Gm5417-201ENSMUST00000079706 384 ntBASIC19.52■□□□□ 0.72
Smarcal1Q8BJL0 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smarcal1Q8BJL0 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Smarcal1Q8BJL0 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Smarcal1Q8BJL0 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Smarcal1Q8BJL0 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Smarcal1Q8BJL0 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
Smarcal1Q8BJL0 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.51■□□□□ 0.71
Smarcal1Q8BJL0 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.51■□□□□ 0.71
Smarcal1Q8BJL0 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.51■□□□□ 0.71
Smarcal1Q8BJL0 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.51■□□□□ 0.71
Smarcal1Q8BJL0 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smarcal1Q8BJL0 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smarcal1Q8BJL0 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smarcal1Q8BJL0 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smarcal1Q8BJL0 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Smarcal1Q8BJL0 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smarcal1Q8BJL0 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Smarcal1Q8BJL0 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Smarcal1Q8BJL0 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smarcal1Q8BJL0 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Smarcal1Q8BJL0 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smarcal1Q8BJL0 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smarcal1Q8BJL0 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Smarcal1Q8BJL0 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.5■□□□□ 0.71
Smarcal1Q8BJL0 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Smarcal1Q8BJL0 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smarcal1Q8BJL0 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Smarcal1Q8BJL0 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
Smarcal1Q8BJL0 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.5■□□□□ 0.71
Smarcal1Q8BJL0 Odf3b-204ENSMUST00000227834 930 ntBASIC19.5■□□□□ 0.71
Smarcal1Q8BJL0 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smarcal1Q8BJL0 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smarcal1Q8BJL0 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.5■□□□□ 0.71
Smarcal1Q8BJL0 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Smarcal1Q8BJL0 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
Smarcal1Q8BJL0 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Smarcal1Q8BJL0 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Smarcal1Q8BJL0 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcal1Q8BJL0 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.49■□□□□ 0.71
Smarcal1Q8BJL0 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
Smarcal1Q8BJL0 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.49■□□□□ 0.71
Smarcal1Q8BJL0 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcal1Q8BJL0 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.49■□□□□ 0.71
Smarcal1Q8BJL0 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcal1Q8BJL0 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcal1Q8BJL0 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcal1Q8BJL0 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcal1Q8BJL0 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcal1Q8BJL0 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcal1Q8BJL0 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcal1Q8BJL0 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcal1Q8BJL0 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smarcal1Q8BJL0 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smarcal1Q8BJL0 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smarcal1Q8BJL0 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smarcal1Q8BJL0 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Smarcal1Q8BJL0 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcal1Q8BJL0 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcal1Q8BJL0 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcal1Q8BJL0 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcal1Q8BJL0 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Smarcal1Q8BJL0 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
Smarcal1Q8BJL0 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.47■□□□□ 0.71
Smarcal1Q8BJL0 Gm43799-201ENSMUST00000201845 579 ntBASIC19.47■□□□□ 0.71
Smarcal1Q8BJL0 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.47■□□□□ 0.71
Smarcal1Q8BJL0 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcal1Q8BJL0 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcal1Q8BJL0 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcal1Q8BJL0 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcal1Q8BJL0 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcal1Q8BJL0 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcal1Q8BJL0 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Smarcal1Q8BJL0 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Smarcal1Q8BJL0 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcal1Q8BJL0 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms