Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Smndc1Q8BGT7 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smndc1Q8BGT7 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Smndc1Q8BGT7 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smndc1Q8BGT7 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smndc1Q8BGT7 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smndc1Q8BGT7 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smndc1Q8BGT7 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smndc1Q8BGT7 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smndc1Q8BGT7 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smndc1Q8BGT7 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.72■□□□□ 0.43
Smndc1Q8BGT7 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smndc1Q8BGT7 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.72■□□□□ 0.43
Smndc1Q8BGT7 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Smndc1Q8BGT7 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.72■□□□□ 0.43
Smndc1Q8BGT7 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smndc1Q8BGT7 Mir6236-201ENSMUST00000184437 123 ntBASIC17.72■□□□□ 0.43
Smndc1Q8BGT7 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Smndc1Q8BGT7 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smndc1Q8BGT7 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smndc1Q8BGT7 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smndc1Q8BGT7 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smndc1Q8BGT7 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smndc1Q8BGT7 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Smndc1Q8BGT7 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Smndc1Q8BGT7 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smndc1Q8BGT7 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Smndc1Q8BGT7 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smndc1Q8BGT7 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smndc1Q8BGT7 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smndc1Q8BGT7 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Smndc1Q8BGT7 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smndc1Q8BGT7 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smndc1Q8BGT7 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
Smndc1Q8BGT7 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Smndc1Q8BGT7 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.71■□□□□ 0.43
Smndc1Q8BGT7 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smndc1Q8BGT7 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smndc1Q8BGT7 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.71■□□□□ 0.43
Smndc1Q8BGT7 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.71■□□□□ 0.43
Smndc1Q8BGT7 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smndc1Q8BGT7 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smndc1Q8BGT7 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smndc1Q8BGT7 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.71■□□□□ 0.42
Smndc1Q8BGT7 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.42
Smndc1Q8BGT7 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Smndc1Q8BGT7 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smndc1Q8BGT7 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smndc1Q8BGT7 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smndc1Q8BGT7 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smndc1Q8BGT7 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Smndc1Q8BGT7 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Smndc1Q8BGT7 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smndc1Q8BGT7 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smndc1Q8BGT7 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Smndc1Q8BGT7 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Smndc1Q8BGT7 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.7■□□□□ 0.42
Smndc1Q8BGT7 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.7■□□□□ 0.42
Smndc1Q8BGT7 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smndc1Q8BGT7 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Smndc1Q8BGT7 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smndc1Q8BGT7 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smndc1Q8BGT7 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smndc1Q8BGT7 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smndc1Q8BGT7 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smndc1Q8BGT7 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smndc1Q8BGT7 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smndc1Q8BGT7 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.69■□□□□ 0.42
Smndc1Q8BGT7 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smndc1Q8BGT7 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smndc1Q8BGT7 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Smndc1Q8BGT7 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Smndc1Q8BGT7 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Smndc1Q8BGT7 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.69■□□□□ 0.42
Smndc1Q8BGT7 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Smndc1Q8BGT7 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Smndc1Q8BGT7 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.69■□□□□ 0.42
Smndc1Q8BGT7 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Smndc1Q8BGT7 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smndc1Q8BGT7 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smndc1Q8BGT7 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.69■□□□□ 0.42
Smndc1Q8BGT7 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smndc1Q8BGT7 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smndc1Q8BGT7 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Smndc1Q8BGT7 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Smndc1Q8BGT7 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smndc1Q8BGT7 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smndc1Q8BGT7 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smndc1Q8BGT7 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smndc1Q8BGT7 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Smndc1Q8BGT7 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smndc1Q8BGT7 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smndc1Q8BGT7 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smndc1Q8BGT7 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Smndc1Q8BGT7 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Smndc1Q8BGT7 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smndc1Q8BGT7 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smndc1Q8BGT7 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smndc1Q8BGT7 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smndc1Q8BGT7 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms