Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ubp1Q811S7 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Ubp1Q811S7 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ubp1Q811S7 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ubp1Q811S7 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ubp1Q811S7 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ubp1Q811S7 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ubp1Q811S7 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.06■□□□□ 0.48
Ubp1Q811S7 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Ubp1Q811S7 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.06■□□□□ 0.48
Ubp1Q811S7 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.06■□□□□ 0.48
Ubp1Q811S7 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ubp1Q811S7 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ubp1Q811S7 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Ubp1Q811S7 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Ubp1Q811S7 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ubp1Q811S7 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ubp1Q811S7 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Ubp1Q811S7 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.06■□□□□ 0.48
Ubp1Q811S7 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ubp1Q811S7 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ubp1Q811S7 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ubp1Q811S7 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ubp1Q811S7 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ubp1Q811S7 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ubp1Q811S7 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Ubp1Q811S7 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.05■□□□□ 0.48
Ubp1Q811S7 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ubp1Q811S7 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ubp1Q811S7 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
Ubp1Q811S7 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Ubp1Q811S7 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ubp1Q811S7 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Ubp1Q811S7 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ubp1Q811S7 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ubp1Q811S7 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Ubp1Q811S7 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ubp1Q811S7 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ubp1Q811S7 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Ubp1Q811S7 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ubp1Q811S7 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
Ubp1Q811S7 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ubp1Q811S7 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ubp1Q811S7 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ubp1Q811S7 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ubp1Q811S7 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ubp1Q811S7 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ubp1Q811S7 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.04■□□□□ 0.48
Ubp1Q811S7 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ubp1Q811S7 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ubp1Q811S7 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.04■□□□□ 0.48
Ubp1Q811S7 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ubp1Q811S7 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ubp1Q811S7 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ubp1Q811S7 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.04■□□□□ 0.48
Ubp1Q811S7 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ubp1Q811S7 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ubp1Q811S7 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ubp1Q811S7 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.03■□□□□ 0.48
Ubp1Q811S7 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ubp1Q811S7 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ubp1Q811S7 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ubp1Q811S7 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ubp1Q811S7 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ubp1Q811S7 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ubp1Q811S7 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ubp1Q811S7 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.03■□□□□ 0.48
Ubp1Q811S7 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ubp1Q811S7 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.03■□□□□ 0.48
Ubp1Q811S7 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.03■□□□□ 0.48
Ubp1Q811S7 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ubp1Q811S7 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ubp1Q811S7 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ubp1Q811S7 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ubp1Q811S7 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ubp1Q811S7 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ubp1Q811S7 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ubp1Q811S7 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ubp1Q811S7 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Ubp1Q811S7 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ubp1Q811S7 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ubp1Q811S7 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ubp1Q811S7 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ubp1Q811S7 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Ubp1Q811S7 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ubp1Q811S7 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Ubp1Q811S7 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Ubp1Q811S7 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ubp1Q811S7 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ubp1Q811S7 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Ubp1Q811S7 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ubp1Q811S7 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.01■□□□□ 0.47
Ubp1Q811S7 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ubp1Q811S7 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ubp1Q811S7 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.01■□□□□ 0.47
Ubp1Q811S7 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ubp1Q811S7 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18■□□□□ 0.47
Ubp1Q811S7 Gm8309-201ENSMUST00000206627 1448 ntBASIC18■□□□□ 0.47
Ubp1Q811S7 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Ubp1Q811S7 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms