Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Ush1gQ80T11 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ush1gQ80T11 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Ush1gQ80T11 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ush1gQ80T11 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.03■□□□□ 0.8
Ush1gQ80T11 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ush1gQ80T11 H2-K2-201ENSMUST00000174250 1049 ntBASIC20.03■□□□□ 0.8
Ush1gQ80T11 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ush1gQ80T11 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ush1gQ80T11 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ush1gQ80T11 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ush1gQ80T11 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Ush1gQ80T11 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Ush1gQ80T11 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ush1gQ80T11 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ush1gQ80T11 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ush1gQ80T11 Mir1199-201ENSMUST00000117015 119 ntBASIC20.02■□□□□ 0.8
Ush1gQ80T11 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.02■□□□□ 0.8
Ush1gQ80T11 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Ush1gQ80T11 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ush1gQ80T11 Gm37055-201ENSMUST00000191866 133 ntBASIC20.02■□□□□ 0.8
Ush1gQ80T11 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Ush1gQ80T11 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ush1gQ80T11 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ush1gQ80T11 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ush1gQ80T11 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ush1gQ80T11 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ush1gQ80T11 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ush1gQ80T11 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ush1gQ80T11 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ush1gQ80T11 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ush1gQ80T11 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ush1gQ80T11 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ush1gQ80T11 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ush1gQ80T11 Gm11643-201ENSMUST00000119578 864 ntBASIC20.01■□□□□ 0.79
Ush1gQ80T11 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Ush1gQ80T11 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ush1gQ80T11 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ush1gQ80T11 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ush1gQ80T11 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ush1gQ80T11 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ush1gQ80T11 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ush1gQ80T11 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ush1gQ80T11 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ush1gQ80T11 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ush1gQ80T11 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ush1gQ80T11 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ush1gQ80T11 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Ush1gQ80T11 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ush1gQ80T11 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ush1gQ80T11 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Ush1gQ80T11 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Ush1gQ80T11 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Ush1gQ80T11 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Ush1gQ80T11 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC20■□□□□ 0.79
Ush1gQ80T11 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC20■□□□□ 0.79
Ush1gQ80T11 AC160393.1-201ENSMUST00000218378 1279 ntBASIC20■□□□□ 0.79
Ush1gQ80T11 AC130671.1-201ENSMUST00000227384 1237 ntBASIC20■□□□□ 0.79
Ush1gQ80T11 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Ush1gQ80T11 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Ush1gQ80T11 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ush1gQ80T11 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Ush1gQ80T11 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Ush1gQ80T11 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
Ush1gQ80T11 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.99■□□□□ 0.79
Ush1gQ80T11 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ush1gQ80T11 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ush1gQ80T11 Gm15565-201ENSMUST00000118890 427 ntBASIC19.99■□□□□ 0.79
Ush1gQ80T11 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ush1gQ80T11 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ush1gQ80T11 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ush1gQ80T11 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ush1gQ80T11 Iqck-206ENSMUST00000208658 2891 ntBASIC19.99■□□□□ 0.79
Ush1gQ80T11 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ush1gQ80T11 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ush1gQ80T11 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ush1gQ80T11 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ush1gQ80T11 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ush1gQ80T11 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Ush1gQ80T11 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ush1gQ80T11 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ush1gQ80T11 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ush1gQ80T11 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.98■□□□□ 0.79
Ush1gQ80T11 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ush1gQ80T11 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Ush1gQ80T11 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ush1gQ80T11 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ush1gQ80T11 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ush1gQ80T11 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ush1gQ80T11 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Ush1gQ80T11 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.97■□□□□ 0.79
Ush1gQ80T11 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ush1gQ80T11 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Ush1gQ80T11 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ush1gQ80T11 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ush1gQ80T11 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Ush1gQ80T11 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ush1gQ80T11 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ush1gQ80T11 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ush1gQ80T11 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms