Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pif1Q80SX8 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pif1Q80SX8 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.86■□□□□ 0.29
Pif1Q80SX8 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pif1Q80SX8 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Pif1Q80SX8 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pif1Q80SX8 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Pif1Q80SX8 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pif1Q80SX8 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pif1Q80SX8 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pif1Q80SX8 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pif1Q80SX8 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pif1Q80SX8 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.85■□□□□ 0.29
Pif1Q80SX8 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.85■□□□□ 0.29
Pif1Q80SX8 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.85■□□□□ 0.29
Pif1Q80SX8 Gm15565-201ENSMUST00000118890 427 ntBASIC16.85■□□□□ 0.29
Pif1Q80SX8 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.85■□□□□ 0.29
Pif1Q80SX8 Gm37055-201ENSMUST00000191866 133 ntBASIC16.85■□□□□ 0.29
Pif1Q80SX8 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.85■□□□□ 0.29
Pif1Q80SX8 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.85■□□□□ 0.29
Pif1Q80SX8 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pif1Q80SX8 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Pif1Q80SX8 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pif1Q80SX8 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.85■□□□□ 0.29
Pif1Q80SX8 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pif1Q80SX8 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.85■□□□□ 0.29
Pif1Q80SX8 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pif1Q80SX8 Flg-201ENSMUST00000050758 1488 ntBASIC16.85■□□□□ 0.29
Pif1Q80SX8 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pif1Q80SX8 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pif1Q80SX8 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pif1Q80SX8 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pif1Q80SX8 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Pif1Q80SX8 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pif1Q80SX8 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pif1Q80SX8 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pif1Q80SX8 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pif1Q80SX8 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.84■□□□□ 0.29
Pif1Q80SX8 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Pif1Q80SX8 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.84■□□□□ 0.29
Pif1Q80SX8 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pif1Q80SX8 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pif1Q80SX8 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pif1Q80SX8 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pif1Q80SX8 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pif1Q80SX8 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pif1Q80SX8 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pif1Q80SX8 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pif1Q80SX8 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Pif1Q80SX8 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pif1Q80SX8 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Pif1Q80SX8 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.83■□□□□ 0.28
Pif1Q80SX8 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pif1Q80SX8 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pif1Q80SX8 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pif1Q80SX8 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pif1Q80SX8 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.83■□□□□ 0.28
Pif1Q80SX8 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pif1Q80SX8 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pif1Q80SX8 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pif1Q80SX8 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Pif1Q80SX8 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pif1Q80SX8 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pif1Q80SX8 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Pif1Q80SX8 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pif1Q80SX8 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.82■□□□□ 0.28
Pif1Q80SX8 Gm11927-201ENSMUST00000118472 759 ntBASIC16.82■□□□□ 0.28
Pif1Q80SX8 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.82■□□□□ 0.28
Pif1Q80SX8 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pif1Q80SX8 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pif1Q80SX8 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.82■□□□□ 0.28
Pif1Q80SX8 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pif1Q80SX8 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Pif1Q80SX8 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pif1Q80SX8 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pif1Q80SX8 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.82■□□□□ 0.28
Pif1Q80SX8 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pif1Q80SX8 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pif1Q80SX8 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pif1Q80SX8 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pif1Q80SX8 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pif1Q80SX8 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pif1Q80SX8 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pif1Q80SX8 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Pif1Q80SX8 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pif1Q80SX8 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.81■□□□□ 0.28
Pif1Q80SX8 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pif1Q80SX8 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pif1Q80SX8 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pif1Q80SX8 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Pif1Q80SX8 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.81■□□□□ 0.28
Pif1Q80SX8 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pif1Q80SX8 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Pif1Q80SX8 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pif1Q80SX8 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Pif1Q80SX8 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pif1Q80SX8 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pif1Q80SX8 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pif1Q80SX8 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pif1Q80SX8 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms