Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ctdp1Q7TSG2 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ctdp1Q7TSG2 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ctdp1Q7TSG2 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ctdp1Q7TSG2 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.95■□□□□ 0.78
Ctdp1Q7TSG2 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ctdp1Q7TSG2 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ctdp1Q7TSG2 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Ctdp1Q7TSG2 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ctdp1Q7TSG2 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ctdp1Q7TSG2 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ctdp1Q7TSG2 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ctdp1Q7TSG2 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ctdp1Q7TSG2 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ctdp1Q7TSG2 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ctdp1Q7TSG2 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.94■□□□□ 0.78
Ctdp1Q7TSG2 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ctdp1Q7TSG2 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ctdp1Q7TSG2 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.94■□□□□ 0.78
Ctdp1Q7TSG2 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ctdp1Q7TSG2 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ctdp1Q7TSG2 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.94■□□□□ 0.78
Ctdp1Q7TSG2 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Ctdp1Q7TSG2 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ctdp1Q7TSG2 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ctdp1Q7TSG2 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.93■□□□□ 0.78
Ctdp1Q7TSG2 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.93■□□□□ 0.78
Ctdp1Q7TSG2 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ctdp1Q7TSG2 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ctdp1Q7TSG2 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.93■□□□□ 0.78
Ctdp1Q7TSG2 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ctdp1Q7TSG2 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ctdp1Q7TSG2 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ctdp1Q7TSG2 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ctdp1Q7TSG2 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Ctdp1Q7TSG2 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ctdp1Q7TSG2 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ctdp1Q7TSG2 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ctdp1Q7TSG2 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ctdp1Q7TSG2 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Ctdp1Q7TSG2 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ctdp1Q7TSG2 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ctdp1Q7TSG2 Gm43060-201ENSMUST00000200621 289 ntBASIC19.92■□□□□ 0.78
Ctdp1Q7TSG2 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ctdp1Q7TSG2 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Ctdp1Q7TSG2 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ctdp1Q7TSG2 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ctdp1Q7TSG2 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ctdp1Q7TSG2 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ctdp1Q7TSG2 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Ctdp1Q7TSG2 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Ctdp1Q7TSG2 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ctdp1Q7TSG2 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.92■□□□□ 0.78
Ctdp1Q7TSG2 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ctdp1Q7TSG2 Fst-202ENSMUST00000223640 2612 ntBASIC19.91■□□□□ 0.78
Ctdp1Q7TSG2 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ctdp1Q7TSG2 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ctdp1Q7TSG2 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ctdp1Q7TSG2 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ctdp1Q7TSG2 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ctdp1Q7TSG2 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ctdp1Q7TSG2 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ctdp1Q7TSG2 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Ctdp1Q7TSG2 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.91■□□□□ 0.78
Ctdp1Q7TSG2 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Ctdp1Q7TSG2 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ctdp1Q7TSG2 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ctdp1Q7TSG2 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Ctdp1Q7TSG2 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ctdp1Q7TSG2 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ctdp1Q7TSG2 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ctdp1Q7TSG2 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Ctdp1Q7TSG2 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ctdp1Q7TSG2 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ctdp1Q7TSG2 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.9■□□□□ 0.78
Ctdp1Q7TSG2 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ctdp1Q7TSG2 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ctdp1Q7TSG2 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ctdp1Q7TSG2 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ctdp1Q7TSG2 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ctdp1Q7TSG2 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ctdp1Q7TSG2 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.89■□□□□ 0.78
Ctdp1Q7TSG2 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Ctdp1Q7TSG2 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Ctdp1Q7TSG2 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
Ctdp1Q7TSG2 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ctdp1Q7TSG2 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.89■□□□□ 0.77
Ctdp1Q7TSG2 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.89■□□□□ 0.77
Ctdp1Q7TSG2 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ctdp1Q7TSG2 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.89■□□□□ 0.77
Ctdp1Q7TSG2 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ctdp1Q7TSG2 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ctdp1Q7TSG2 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ctdp1Q7TSG2 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ctdp1Q7TSG2 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ctdp1Q7TSG2 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ctdp1Q7TSG2 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ctdp1Q7TSG2 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ctdp1Q7TSG2 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ctdp1Q7TSG2 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms