Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Rfx4Q7TNK1 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rfx4Q7TNK1 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Rfx4Q7TNK1 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rfx4Q7TNK1 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rfx4Q7TNK1 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rfx4Q7TNK1 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.58■□□□□ 0.4
Rfx4Q7TNK1 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rfx4Q7TNK1 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rfx4Q7TNK1 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rfx4Q7TNK1 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rfx4Q7TNK1 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rfx4Q7TNK1 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rfx4Q7TNK1 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rfx4Q7TNK1 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rfx4Q7TNK1 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rfx4Q7TNK1 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rfx4Q7TNK1 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rfx4Q7TNK1 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rfx4Q7TNK1 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfx4Q7TNK1 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfx4Q7TNK1 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.57■□□□□ 0.4
Rfx4Q7TNK1 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.57■□□□□ 0.4
Rfx4Q7TNK1 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfx4Q7TNK1 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfx4Q7TNK1 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rfx4Q7TNK1 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rfx4Q7TNK1 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Rfx4Q7TNK1 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rfx4Q7TNK1 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfx4Q7TNK1 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfx4Q7TNK1 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Rfx4Q7TNK1 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Rfx4Q7TNK1 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfx4Q7TNK1 Fst-202ENSMUST00000223640 2612 ntBASIC17.56■□□□□ 0.4
Rfx4Q7TNK1 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfx4Q7TNK1 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rfx4Q7TNK1 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfx4Q7TNK1 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfx4Q7TNK1 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Rfx4Q7TNK1 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfx4Q7TNK1 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfx4Q7TNK1 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rfx4Q7TNK1 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfx4Q7TNK1 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Rfx4Q7TNK1 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Rfx4Q7TNK1 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfx4Q7TNK1 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx4Q7TNK1 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx4Q7TNK1 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx4Q7TNK1 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx4Q7TNK1 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Rfx4Q7TNK1 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx4Q7TNK1 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx4Q7TNK1 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx4Q7TNK1 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.55■□□□□ 0.4
Rfx4Q7TNK1 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx4Q7TNK1 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Rfx4Q7TNK1 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Rfx4Q7TNK1 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx4Q7TNK1 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx4Q7TNK1 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx4Q7TNK1 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx4Q7TNK1 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx4Q7TNK1 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx4Q7TNK1 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx4Q7TNK1 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.55■□□□□ 0.4
Rfx4Q7TNK1 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.55■□□□□ 0.4
Rfx4Q7TNK1 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx4Q7TNK1 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfx4Q7TNK1 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfx4Q7TNK1 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.54■□□□□ 0.4
Rfx4Q7TNK1 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rfx4Q7TNK1 Gm45102-201ENSMUST00000207427 857 ntBASIC17.54■□□□□ 0.4
Rfx4Q7TNK1 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfx4Q7TNK1 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfx4Q7TNK1 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfx4Q7TNK1 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfx4Q7TNK1 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfx4Q7TNK1 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfx4Q7TNK1 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfx4Q7TNK1 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfx4Q7TNK1 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfx4Q7TNK1 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Rfx4Q7TNK1 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfx4Q7TNK1 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Rfx4Q7TNK1 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfx4Q7TNK1 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfx4Q7TNK1 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfx4Q7TNK1 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Rfx4Q7TNK1 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.53■□□□□ 0.4
Rfx4Q7TNK1 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Rfx4Q7TNK1 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Rfx4Q7TNK1 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfx4Q7TNK1 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfx4Q7TNK1 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfx4Q7TNK1 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfx4Q7TNK1 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfx4Q7TNK1 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Rfx4Q7TNK1 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms