Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scn4bQ7M729 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Scn4bQ7M729 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Scn4bQ7M729 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Scn4bQ7M729 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Scn4bQ7M729 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Scn4bQ7M729 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Scn4bQ7M729 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.83■□□□□ 0.45
Scn4bQ7M729 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Scn4bQ7M729 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Scn4bQ7M729 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scn4bQ7M729 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.83■□□□□ 0.44
Scn4bQ7M729 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
Scn4bQ7M729 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scn4bQ7M729 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Scn4bQ7M729 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scn4bQ7M729 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Scn4bQ7M729 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn4bQ7M729 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn4bQ7M729 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn4bQ7M729 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.82■□□□□ 0.44
Scn4bQ7M729 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.82■□□□□ 0.44
Scn4bQ7M729 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.82■□□□□ 0.44
Scn4bQ7M729 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Scn4bQ7M729 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Scn4bQ7M729 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Scn4bQ7M729 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn4bQ7M729 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn4bQ7M729 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn4bQ7M729 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn4bQ7M729 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.82■□□□□ 0.44
Scn4bQ7M729 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn4bQ7M729 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
Scn4bQ7M729 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Scn4bQ7M729 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn4bQ7M729 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn4bQ7M729 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Scn4bQ7M729 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.81■□□□□ 0.44
Scn4bQ7M729 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn4bQ7M729 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn4bQ7M729 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Scn4bQ7M729 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.81■□□□□ 0.44
Scn4bQ7M729 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Scn4bQ7M729 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Scn4bQ7M729 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Scn4bQ7M729 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Scn4bQ7M729 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn4bQ7M729 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scn4bQ7M729 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scn4bQ7M729 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Scn4bQ7M729 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
Scn4bQ7M729 Gm27405-201ENSMUST00000184201 112 ntBASIC17.8■□□□□ 0.44
Scn4bQ7M729 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.8■□□□□ 0.44
Scn4bQ7M729 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scn4bQ7M729 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scn4bQ7M729 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.8■□□□□ 0.44
Scn4bQ7M729 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scn4bQ7M729 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scn4bQ7M729 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scn4bQ7M729 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.8■□□□□ 0.44
Scn4bQ7M729 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn4bQ7M729 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.79■□□□□ 0.44
Scn4bQ7M729 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Scn4bQ7M729 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn4bQ7M729 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn4bQ7M729 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn4bQ7M729 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.79■□□□□ 0.44
Scn4bQ7M729 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Scn4bQ7M729 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.79■□□□□ 0.44
Scn4bQ7M729 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.79■□□□□ 0.44
Scn4bQ7M729 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn4bQ7M729 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.79■□□□□ 0.44
Scn4bQ7M729 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn4bQ7M729 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Scn4bQ7M729 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn4bQ7M729 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.79■□□□□ 0.44
Scn4bQ7M729 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn4bQ7M729 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn4bQ7M729 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn4bQ7M729 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn4bQ7M729 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Scn4bQ7M729 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Scn4bQ7M729 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Scn4bQ7M729 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn4bQ7M729 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn4bQ7M729 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn4bQ7M729 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn4bQ7M729 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.78■□□□□ 0.44
Scn4bQ7M729 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn4bQ7M729 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.78■□□□□ 0.44
Scn4bQ7M729 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scn4bQ7M729 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scn4bQ7M729 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.77■□□□□ 0.44
Scn4bQ7M729 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.77■□□□□ 0.44
Scn4bQ7M729 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Scn4bQ7M729 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scn4bQ7M729 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scn4bQ7M729 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Scn4bQ7M729 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scn4bQ7M729 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms