Protein–RNA interactions for Protein: Q6XAS3

Ssx9, MCG116991, isoform CRA_b, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx9Q6XAS3 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.27■□□□□ 0.52
Ssx9Q6XAS3 Gm42778-201ENSMUST00000199644 553 ntBASIC18.27■□□□□ 0.52
Ssx9Q6XAS3 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ssx9Q6XAS3 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ssx9Q6XAS3 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Ssx9Q6XAS3 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ssx9Q6XAS3 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ssx9Q6XAS3 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ssx9Q6XAS3 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ssx9Q6XAS3 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.26■□□□□ 0.51
Ssx9Q6XAS3 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ssx9Q6XAS3 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ssx9Q6XAS3 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.26■□□□□ 0.51
Ssx9Q6XAS3 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.26■□□□□ 0.51
Ssx9Q6XAS3 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ssx9Q6XAS3 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.26■□□□□ 0.51
Ssx9Q6XAS3 Gm10493-201ENSMUST00000097270 612 ntBASIC18.26■□□□□ 0.51
Ssx9Q6XAS3 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ssx9Q6XAS3 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ssx9Q6XAS3 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ssx9Q6XAS3 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ssx9Q6XAS3 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ssx9Q6XAS3 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ssx9Q6XAS3 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ssx9Q6XAS3 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ssx9Q6XAS3 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ssx9Q6XAS3 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ssx9Q6XAS3 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.25■□□□□ 0.51
Ssx9Q6XAS3 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ssx9Q6XAS3 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ssx9Q6XAS3 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
Ssx9Q6XAS3 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ssx9Q6XAS3 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.24■□□□□ 0.51
Ssx9Q6XAS3 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ssx9Q6XAS3 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ssx9Q6XAS3 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ssx9Q6XAS3 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ssx9Q6XAS3 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ssx9Q6XAS3 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ssx9Q6XAS3 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Ssx9Q6XAS3 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ssx9Q6XAS3 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ssx9Q6XAS3 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ssx9Q6XAS3 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.23■□□□□ 0.51
Ssx9Q6XAS3 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.23■□□□□ 0.51
Ssx9Q6XAS3 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ssx9Q6XAS3 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Ssx9Q6XAS3 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Ssx9Q6XAS3 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.23■□□□□ 0.51
Ssx9Q6XAS3 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.23■□□□□ 0.51
Ssx9Q6XAS3 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.23■□□□□ 0.51
Ssx9Q6XAS3 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ssx9Q6XAS3 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ssx9Q6XAS3 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ssx9Q6XAS3 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ssx9Q6XAS3 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ssx9Q6XAS3 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ssx9Q6XAS3 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ssx9Q6XAS3 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ssx9Q6XAS3 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ssx9Q6XAS3 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ssx9Q6XAS3 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ssx9Q6XAS3 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Ssx9Q6XAS3 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ssx9Q6XAS3 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.22■□□□□ 0.51
Ssx9Q6XAS3 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.22■□□□□ 0.51
Ssx9Q6XAS3 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ssx9Q6XAS3 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ssx9Q6XAS3 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ssx9Q6XAS3 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ssx9Q6XAS3 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.21■□□□□ 0.51
Ssx9Q6XAS3 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Ssx9Q6XAS3 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Ssx9Q6XAS3 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ssx9Q6XAS3 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.21■□□□□ 0.51
Ssx9Q6XAS3 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ssx9Q6XAS3 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ssx9Q6XAS3 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Ssx9Q6XAS3 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ssx9Q6XAS3 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ssx9Q6XAS3 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ssx9Q6XAS3 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Ssx9Q6XAS3 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.2■□□□□ 0.5
Ssx9Q6XAS3 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Ssx9Q6XAS3 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Ssx9Q6XAS3 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.2■□□□□ 0.5
Ssx9Q6XAS3 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ssx9Q6XAS3 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ssx9Q6XAS3 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ssx9Q6XAS3 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Ssx9Q6XAS3 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ssx9Q6XAS3 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ssx9Q6XAS3 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ssx9Q6XAS3 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ssx9Q6XAS3 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ssx9Q6XAS3 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Ssx9Q6XAS3 Fst-202ENSMUST00000223640 2612 ntBASIC18.19■□□□□ 0.5
Ssx9Q6XAS3 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ssx9Q6XAS3 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ssx9Q6XAS3 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms