Protein–RNA interactions for Protein: Q6PFE7

Tmeff1, Tomoregulin-1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmeff1Q6PFE7 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tmeff1Q6PFE7 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Tmeff1Q6PFE7 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Tmeff1Q6PFE7 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.83■□□□□ 0.45
Tmeff1Q6PFE7 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Tmeff1Q6PFE7 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Tmeff1Q6PFE7 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Tmeff1Q6PFE7 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Tmeff1Q6PFE7 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tmeff1Q6PFE7 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tmeff1Q6PFE7 Gm12382-201ENSMUST00000122005 922 ntBASIC17.83■□□□□ 0.44
Tmeff1Q6PFE7 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tmeff1Q6PFE7 Gm7889-201ENSMUST00000185591 958 ntBASIC17.83■□□□□ 0.44
Tmeff1Q6PFE7 Timm23-208ENSMUST00000226683 750 ntBASIC17.83■□□□□ 0.44
Tmeff1Q6PFE7 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tmeff1Q6PFE7 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Tmeff1Q6PFE7 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tmeff1Q6PFE7 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tmeff1Q6PFE7 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tmeff1Q6PFE7 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tmeff1Q6PFE7 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tmeff1Q6PFE7 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Tmeff1Q6PFE7 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tmeff1Q6PFE7 Gm38285-201ENSMUST00000192928 922 ntBASIC17.82■□□□□ 0.44
Tmeff1Q6PFE7 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.82■□□□□ 0.44
Tmeff1Q6PFE7 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.82■□□□□ 0.44
Tmeff1Q6PFE7 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tmeff1Q6PFE7 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tmeff1Q6PFE7 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
Tmeff1Q6PFE7 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tmeff1Q6PFE7 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tmeff1Q6PFE7 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tmeff1Q6PFE7 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Tmeff1Q6PFE7 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Tmeff1Q6PFE7 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Tmeff1Q6PFE7 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tmeff1Q6PFE7 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tmeff1Q6PFE7 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tmeff1Q6PFE7 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
Tmeff1Q6PFE7 Odf3b-204ENSMUST00000227834 930 ntBASIC17.81■□□□□ 0.44
Tmeff1Q6PFE7 Gm7367-201ENSMUST00000057611 492 ntBASIC17.81■□□□□ 0.44
Tmeff1Q6PFE7 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Tmeff1Q6PFE7 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Tmeff1Q6PFE7 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
Tmeff1Q6PFE7 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tmeff1Q6PFE7 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tmeff1Q6PFE7 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Tmeff1Q6PFE7 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tmeff1Q6PFE7 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tmeff1Q6PFE7 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.81■□□□□ 0.44
Tmeff1Q6PFE7 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tmeff1Q6PFE7 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.8■□□□□ 0.44
Tmeff1Q6PFE7 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Tmeff1Q6PFE7 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tmeff1Q6PFE7 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Tmeff1Q6PFE7 Gm3375-201ENSMUST00000203929 796 ntBASIC17.8■□□□□ 0.44
Tmeff1Q6PFE7 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Tmeff1Q6PFE7 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Tmeff1Q6PFE7 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tmeff1Q6PFE7 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tmeff1Q6PFE7 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tmeff1Q6PFE7 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tmeff1Q6PFE7 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tmeff1Q6PFE7 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.79■□□□□ 0.44
Tmeff1Q6PFE7 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tmeff1Q6PFE7 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.79■□□□□ 0.44
Tmeff1Q6PFE7 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.79■□□□□ 0.44
Tmeff1Q6PFE7 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tmeff1Q6PFE7 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tmeff1Q6PFE7 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tmeff1Q6PFE7 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tmeff1Q6PFE7 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tmeff1Q6PFE7 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tmeff1Q6PFE7 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tmeff1Q6PFE7 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tmeff1Q6PFE7 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Tmeff1Q6PFE7 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tmeff1Q6PFE7 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tmeff1Q6PFE7 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tmeff1Q6PFE7 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tmeff1Q6PFE7 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tmeff1Q6PFE7 Gm6659-201ENSMUST00000174752 547 ntBASIC17.78■□□□□ 0.44
Tmeff1Q6PFE7 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tmeff1Q6PFE7 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.78■□□□□ 0.44
Tmeff1Q6PFE7 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tmeff1Q6PFE7 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Tmeff1Q6PFE7 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tmeff1Q6PFE7 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.78■□□□□ 0.44
Tmeff1Q6PFE7 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tmeff1Q6PFE7 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.77■□□□□ 0.44
Tmeff1Q6PFE7 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Tmeff1Q6PFE7 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.77■□□□□ 0.44
Tmeff1Q6PFE7 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.77■□□□□ 0.44
Tmeff1Q6PFE7 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
Tmeff1Q6PFE7 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tmeff1Q6PFE7 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Tmeff1Q6PFE7 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.77■□□□□ 0.44
Tmeff1Q6PFE7 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Tmeff1Q6PFE7 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tmeff1Q6PFE7 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms