Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Hmgb4Q6P8W9 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.13■□□□□ 0.65
Hmgb4Q6P8W9 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Hmgb4Q6P8W9 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hmgb4Q6P8W9 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hmgb4Q6P8W9 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hmgb4Q6P8W9 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hmgb4Q6P8W9 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hmgb4Q6P8W9 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hmgb4Q6P8W9 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hmgb4Q6P8W9 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.13■□□□□ 0.65
Hmgb4Q6P8W9 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Hmgb4Q6P8W9 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Hmgb4Q6P8W9 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hmgb4Q6P8W9 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hmgb4Q6P8W9 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hmgb4Q6P8W9 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hmgb4Q6P8W9 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.12■□□□□ 0.65
Hmgb4Q6P8W9 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Hmgb4Q6P8W9 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Hmgb4Q6P8W9 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Hmgb4Q6P8W9 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Hmgb4Q6P8W9 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hmgb4Q6P8W9 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Hmgb4Q6P8W9 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hmgb4Q6P8W9 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hmgb4Q6P8W9 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hmgb4Q6P8W9 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hmgb4Q6P8W9 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hmgb4Q6P8W9 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hmgb4Q6P8W9 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.11■□□□□ 0.65
Hmgb4Q6P8W9 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Hmgb4Q6P8W9 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Hmgb4Q6P8W9 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hmgb4Q6P8W9 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Hmgb4Q6P8W9 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.11■□□□□ 0.65
Hmgb4Q6P8W9 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC19.11■□□□□ 0.65
Hmgb4Q6P8W9 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.11■□□□□ 0.65
Hmgb4Q6P8W9 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.11■□□□□ 0.65
Hmgb4Q6P8W9 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.11■□□□□ 0.65
Hmgb4Q6P8W9 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hmgb4Q6P8W9 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hmgb4Q6P8W9 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Hmgb4Q6P8W9 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.11■□□□□ 0.65
Hmgb4Q6P8W9 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hmgb4Q6P8W9 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hmgb4Q6P8W9 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hmgb4Q6P8W9 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hmgb4Q6P8W9 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hmgb4Q6P8W9 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.11■□□□□ 0.65
Hmgb4Q6P8W9 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hmgb4Q6P8W9 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.1■□□□□ 0.65
Hmgb4Q6P8W9 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hmgb4Q6P8W9 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hmgb4Q6P8W9 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Hmgb4Q6P8W9 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hmgb4Q6P8W9 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Hmgb4Q6P8W9 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hmgb4Q6P8W9 Mir6982-201ENSMUST00000184354 68 ntBASIC19.1■□□□□ 0.65
Hmgb4Q6P8W9 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hmgb4Q6P8W9 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.1■□□□□ 0.65
Hmgb4Q6P8W9 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Hmgb4Q6P8W9 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Hmgb4Q6P8W9 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hmgb4Q6P8W9 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Hmgb4Q6P8W9 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hmgb4Q6P8W9 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
Hmgb4Q6P8W9 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Hmgb4Q6P8W9 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Hmgb4Q6P8W9 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Hmgb4Q6P8W9 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hmgb4Q6P8W9 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hmgb4Q6P8W9 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hmgb4Q6P8W9 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.09■□□□□ 0.65
Hmgb4Q6P8W9 Rarb-207ENSMUST00000225921 2756 ntBASIC19.09■□□□□ 0.65
Hmgb4Q6P8W9 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Hmgb4Q6P8W9 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Hmgb4Q6P8W9 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Hmgb4Q6P8W9 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Hmgb4Q6P8W9 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
Hmgb4Q6P8W9 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Hmgb4Q6P8W9 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Hmgb4Q6P8W9 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.08■□□□□ 0.64
Hmgb4Q6P8W9 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Hmgb4Q6P8W9 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hmgb4Q6P8W9 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Hmgb4Q6P8W9 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hmgb4Q6P8W9 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.08■□□□□ 0.64
Hmgb4Q6P8W9 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hmgb4Q6P8W9 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hmgb4Q6P8W9 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hmgb4Q6P8W9 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Hmgb4Q6P8W9 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hmgb4Q6P8W9 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hmgb4Q6P8W9 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hmgb4Q6P8W9 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Hmgb4Q6P8W9 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hmgb4Q6P8W9 Gm44549-201ENSMUST00000208351 577 ntBASIC19.07■□□□□ 0.64
Hmgb4Q6P8W9 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.07■□□□□ 0.64
Hmgb4Q6P8W9 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms