Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
Sp140Q6NSQ5 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sp140Q6NSQ5 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Sp140Q6NSQ5 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
Sp140Q6NSQ5 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sp140Q6NSQ5 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Sp140Q6NSQ5 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sp140Q6NSQ5 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.59■□□□□ 0.57
Sp140Q6NSQ5 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Sp140Q6NSQ5 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sp140Q6NSQ5 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.59■□□□□ 0.57
Sp140Q6NSQ5 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sp140Q6NSQ5 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Sp140Q6NSQ5 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
Sp140Q6NSQ5 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sp140Q6NSQ5 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Sp140Q6NSQ5 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Sp140Q6NSQ5 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sp140Q6NSQ5 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sp140Q6NSQ5 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sp140Q6NSQ5 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.58■□□□□ 0.57
Sp140Q6NSQ5 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sp140Q6NSQ5 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Sp140Q6NSQ5 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.58■□□□□ 0.56
Sp140Q6NSQ5 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sp140Q6NSQ5 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Sp140Q6NSQ5 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Sp140Q6NSQ5 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sp140Q6NSQ5 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sp140Q6NSQ5 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.57■□□□□ 0.56
Sp140Q6NSQ5 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sp140Q6NSQ5 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sp140Q6NSQ5 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.57■□□□□ 0.56
Sp140Q6NSQ5 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.57■□□□□ 0.56
Sp140Q6NSQ5 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sp140Q6NSQ5 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sp140Q6NSQ5 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.57■□□□□ 0.56
Sp140Q6NSQ5 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Sp140Q6NSQ5 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sp140Q6NSQ5 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sp140Q6NSQ5 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.57■□□□□ 0.56
Sp140Q6NSQ5 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sp140Q6NSQ5 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sp140Q6NSQ5 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sp140Q6NSQ5 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Sp140Q6NSQ5 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.56■□□□□ 0.56
Sp140Q6NSQ5 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Sp140Q6NSQ5 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Sp140Q6NSQ5 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.56■□□□□ 0.56
Sp140Q6NSQ5 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.56■□□□□ 0.56
Sp140Q6NSQ5 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sp140Q6NSQ5 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Sp140Q6NSQ5 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.56■□□□□ 0.56
Sp140Q6NSQ5 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sp140Q6NSQ5 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.56■□□□□ 0.56
Sp140Q6NSQ5 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sp140Q6NSQ5 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Sp140Q6NSQ5 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sp140Q6NSQ5 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Sp140Q6NSQ5 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.55■□□□□ 0.56
Sp140Q6NSQ5 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sp140Q6NSQ5 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sp140Q6NSQ5 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Sp140Q6NSQ5 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sp140Q6NSQ5 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sp140Q6NSQ5 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sp140Q6NSQ5 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.55■□□□□ 0.56
Sp140Q6NSQ5 Gm26571-201ENSMUST00000181399 666 ntBASIC18.55■□□□□ 0.56
Sp140Q6NSQ5 AV356131-201ENSMUST00000206201 750 ntBASIC18.55■□□□□ 0.56
Sp140Q6NSQ5 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.55■□□□□ 0.56
Sp140Q6NSQ5 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sp140Q6NSQ5 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sp140Q6NSQ5 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sp140Q6NSQ5 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.55■□□□□ 0.56
Sp140Q6NSQ5 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sp140Q6NSQ5 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sp140Q6NSQ5 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Sp140Q6NSQ5 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sp140Q6NSQ5 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sp140Q6NSQ5 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Sp140Q6NSQ5 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Sp140Q6NSQ5 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sp140Q6NSQ5 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.54■□□□□ 0.56
Sp140Q6NSQ5 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Sp140Q6NSQ5 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sp140Q6NSQ5 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.53■□□□□ 0.56
Sp140Q6NSQ5 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.53■□□□□ 0.56
Sp140Q6NSQ5 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sp140Q6NSQ5 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sp140Q6NSQ5 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sp140Q6NSQ5 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Sp140Q6NSQ5 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sp140Q6NSQ5 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Sp140Q6NSQ5 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sp140Q6NSQ5 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sp140Q6NSQ5 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Sp140Q6NSQ5 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Sp140Q6NSQ5 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Sp140Q6NSQ5 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sp140Q6NSQ5 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms