Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhga7Q6DD96 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhga7Q6DD96 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhga7Q6DD96 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhga7Q6DD96 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhga7Q6DD96 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhga7Q6DD96 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhga7Q6DD96 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhga7Q6DD96 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhga7Q6DD96 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhga7Q6DD96 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Pcdhga7Q6DD96 Reep4-203ENSMUST00000226563 1444 ntBASIC17.76■□□□□ 0.43
Pcdhga7Q6DD96 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
Pcdhga7Q6DD96 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhga7Q6DD96 Gm9988-201ENSMUST00000069786 435 ntBASIC17.76■□□□□ 0.43
Pcdhga7Q6DD96 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhga7Q6DD96 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
Pcdhga7Q6DD96 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.76■□□□□ 0.43
Pcdhga7Q6DD96 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhga7Q6DD96 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhga7Q6DD96 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Pcdhga7Q6DD96 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhga7Q6DD96 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhga7Q6DD96 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhga7Q6DD96 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Pcdhga7Q6DD96 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhga7Q6DD96 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhga7Q6DD96 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Pcdhga7Q6DD96 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhga7Q6DD96 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
Pcdhga7Q6DD96 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhga7Q6DD96 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Pcdhga7Q6DD96 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.75■□□□□ 0.43
Pcdhga7Q6DD96 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhga7Q6DD96 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhga7Q6DD96 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhga7Q6DD96 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhga7Q6DD96 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
Pcdhga7Q6DD96 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhga7Q6DD96 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhga7Q6DD96 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhga7Q6DD96 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhga7Q6DD96 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.74■□□□□ 0.43
Pcdhga7Q6DD96 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhga7Q6DD96 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.74■□□□□ 0.43
Pcdhga7Q6DD96 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhga7Q6DD96 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhga7Q6DD96 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhga7Q6DD96 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Pcdhga7Q6DD96 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhga7Q6DD96 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhga7Q6DD96 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhga7Q6DD96 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhga7Q6DD96 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhga7Q6DD96 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.73■□□□□ 0.43
Pcdhga7Q6DD96 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
Pcdhga7Q6DD96 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhga7Q6DD96 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhga7Q6DD96 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhga7Q6DD96 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhga7Q6DD96 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhga7Q6DD96 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhga7Q6DD96 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhga7Q6DD96 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhga7Q6DD96 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhga7Q6DD96 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Pcdhga7Q6DD96 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Pcdhga7Q6DD96 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhga7Q6DD96 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhga7Q6DD96 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Pcdhga7Q6DD96 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhga7Q6DD96 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhga7Q6DD96 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhga7Q6DD96 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhga7Q6DD96 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.71■□□□□ 0.43
Pcdhga7Q6DD96 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.71■□□□□ 0.43
Pcdhga7Q6DD96 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhga7Q6DD96 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhga7Q6DD96 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhga7Q6DD96 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhga7Q6DD96 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhga7Q6DD96 Gm13534-201ENSMUST00000121169 513 ntBASIC17.71■□□□□ 0.43
Pcdhga7Q6DD96 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhga7Q6DD96 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.71■□□□□ 0.43
Pcdhga7Q6DD96 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Pcdhga7Q6DD96 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhga7Q6DD96 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.71■□□□□ 0.43
Pcdhga7Q6DD96 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhga7Q6DD96 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhga7Q6DD96 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Pcdhga7Q6DD96 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.71■□□□□ 0.42
Pcdhga7Q6DD96 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pcdhga7Q6DD96 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pcdhga7Q6DD96 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhga7Q6DD96 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhga7Q6DD96 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhga7Q6DD96 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhga7Q6DD96 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhga7Q6DD96 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.7■□□□□ 0.42
Pcdhga7Q6DD96 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms