Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Clcn1Q64347 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Clcn1Q64347 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC23.22■■□□□ 1.31
Clcn1Q64347 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
Clcn1Q64347 AC175538.1-201ENSMUST00000225343 1269 ntBASIC23.22■■□□□ 1.31
Clcn1Q64347 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
Clcn1Q64347 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Clcn1Q64347 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Clcn1Q64347 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Clcn1Q64347 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Clcn1Q64347 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC23.22■■□□□ 1.31
Clcn1Q64347 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Clcn1Q64347 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Clcn1Q64347 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Clcn1Q64347 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Clcn1Q64347 Gm11643-201ENSMUST00000119578 864 ntBASIC23.21■■□□□ 1.31
Clcn1Q64347 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC23.21■■□□□ 1.31
Clcn1Q64347 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC23.21■■□□□ 1.31
Clcn1Q64347 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Clcn1Q64347 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC23.21■■□□□ 1.31
Clcn1Q64347 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Clcn1Q64347 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
Clcn1Q64347 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Clcn1Q64347 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC23.21■■□□□ 1.31
Clcn1Q64347 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Clcn1Q64347 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Clcn1Q64347 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Clcn1Q64347 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Clcn1Q64347 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Clcn1Q64347 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC23.2■■□□□ 1.3
Clcn1Q64347 AC121577.1-201ENSMUST00000227302 707 ntBASIC23.2■■□□□ 1.3
Clcn1Q64347 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Clcn1Q64347 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Clcn1Q64347 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Clcn1Q64347 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC23.2■■□□□ 1.3
Clcn1Q64347 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Clcn1Q64347 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Clcn1Q64347 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Clcn1Q64347 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC23.19■■□□□ 1.3
Clcn1Q64347 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Clcn1Q64347 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
Clcn1Q64347 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
Clcn1Q64347 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Clcn1Q64347 Gm43183-201ENSMUST00000200632 547 ntBASIC23.19■■□□□ 1.3
Clcn1Q64347 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Clcn1Q64347 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
Clcn1Q64347 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Clcn1Q64347 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Clcn1Q64347 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Clcn1Q64347 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Clcn1Q64347 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Clcn1Q64347 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Clcn1Q64347 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Clcn1Q64347 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC23.18■■□□□ 1.3
Clcn1Q64347 Gm8309-201ENSMUST00000206627 1448 ntBASIC23.18■■□□□ 1.3
Clcn1Q64347 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC23.18■■□□□ 1.3
Clcn1Q64347 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Clcn1Q64347 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC23.18■■□□□ 1.3
Clcn1Q64347 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
Clcn1Q64347 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Clcn1Q64347 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Clcn1Q64347 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC23.18■■□□□ 1.3
Clcn1Q64347 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Clcn1Q64347 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
Clcn1Q64347 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Clcn1Q64347 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
Clcn1Q64347 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Clcn1Q64347 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Clcn1Q64347 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Clcn1Q64347 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Clcn1Q64347 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Clcn1Q64347 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC23.17■■□□□ 1.3
Clcn1Q64347 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Clcn1Q64347 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Clcn1Q64347 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Clcn1Q64347 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Clcn1Q64347 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Clcn1Q64347 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Clcn1Q64347 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Clcn1Q64347 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
Clcn1Q64347 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC23.16■■□□□ 1.3
Clcn1Q64347 Gm10231-201ENSMUST00000181584 441 ntBASIC23.16■■□□□ 1.3
Clcn1Q64347 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Clcn1Q64347 Gm10175-202ENSMUST00000208752 441 ntBASIC23.16■■□□□ 1.3
Clcn1Q64347 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC23.16■■□□□ 1.3
Clcn1Q64347 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Clcn1Q64347 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Clcn1Q64347 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Clcn1Q64347 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Clcn1Q64347 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Clcn1Q64347 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Clcn1Q64347 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Clcn1Q64347 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Clcn1Q64347 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Clcn1Q64347 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Clcn1Q64347 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Clcn1Q64347 Zfp783-201ENSMUST00000095946 670 ntBASIC23.15■■□□□ 1.3
Clcn1Q64347 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Clcn1Q64347 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Clcn1Q64347 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms