Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Flg-201ENSMUST00000050758 1488 ntBASIC19.12■□□□□ 0.65
Smarcd1Q61466 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.12■□□□□ 0.65
Smarcd1Q61466 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.12■□□□□ 0.65
Smarcd1Q61466 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Smarcd1Q61466 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Smarcd1Q61466 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smarcd1Q61466 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcd1Q61466 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcd1Q61466 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcd1Q61466 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcd1Q61466 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcd1Q61466 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcd1Q61466 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcd1Q61466 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcd1Q61466 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcd1Q61466 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcd1Q61466 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcd1Q61466 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcd1Q61466 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Smarcd1Q61466 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcd1Q61466 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcd1Q61466 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Smarcd1Q61466 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Smarcd1Q61466 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Smarcd1Q61466 Gm8520-201ENSMUST00000186517 868 ntBASIC19.1■□□□□ 0.65
Smarcd1Q61466 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smarcd1Q61466 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Smarcd1Q61466 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.1■□□□□ 0.65
Smarcd1Q61466 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.1■□□□□ 0.65
Smarcd1Q61466 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.1■□□□□ 0.65
Smarcd1Q61466 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Smarcd1Q61466 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smarcd1Q61466 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Smarcd1Q61466 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smarcd1Q61466 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smarcd1Q61466 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smarcd1Q61466 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smarcd1Q61466 Gm11249-201ENSMUST00000117071 859 ntBASIC19.09■□□□□ 0.65
Smarcd1Q61466 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smarcd1Q61466 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.09■□□□□ 0.65
Smarcd1Q61466 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smarcd1Q61466 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.09■□□□□ 0.65
Smarcd1Q61466 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Smarcd1Q61466 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.09■□□□□ 0.65
Smarcd1Q61466 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Smarcd1Q61466 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smarcd1Q61466 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smarcd1Q61466 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.08■□□□□ 0.65
Smarcd1Q61466 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Smarcd1Q61466 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Smarcd1Q61466 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Smarcd1Q61466 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Smarcd1Q61466 Gm13168-201ENSMUST00000121771 632 ntBASIC19.08■□□□□ 0.64
Smarcd1Q61466 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smarcd1Q61466 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smarcd1Q61466 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Smarcd1Q61466 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smarcd1Q61466 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.08■□□□□ 0.64
Smarcd1Q61466 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Smarcd1Q61466 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Smarcd1Q61466 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smarcd1Q61466 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smarcd1Q61466 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smarcd1Q61466 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Smarcd1Q61466 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.07■□□□□ 0.64
Smarcd1Q61466 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Smarcd1Q61466 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Smarcd1Q61466 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smarcd1Q61466 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smarcd1Q61466 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.07■□□□□ 0.64
Smarcd1Q61466 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smarcd1Q61466 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smarcd1Q61466 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
Smarcd1Q61466 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Smarcd1Q61466 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smarcd1Q61466 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Smarcd1Q61466 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smarcd1Q61466 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Smarcd1Q61466 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smarcd1Q61466 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Smarcd1Q61466 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smarcd1Q61466 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.06■□□□□ 0.64
Smarcd1Q61466 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smarcd1Q61466 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Smarcd1Q61466 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
Smarcd1Q61466 Gm11927-201ENSMUST00000118472 759 ntBASIC19.05■□□□□ 0.64
Smarcd1Q61466 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Smarcd1Q61466 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smarcd1Q61466 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Smarcd1Q61466 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smarcd1Q61466 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Smarcd1Q61466 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smarcd1Q61466 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.05■□□□□ 0.64
Smarcd1Q61466 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smarcd1Q61466 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smarcd1Q61466 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smarcd1Q61466 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smarcd1Q61466 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smarcd1Q61466 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
Smarcd1Q61466 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms