Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ift88Q61371 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Ift88Q61371 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ift88Q61371 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ift88Q61371 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Ift88Q61371 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Ift88Q61371 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ift88Q61371 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ift88Q61371 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ift88Q61371 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ift88Q61371 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.3■□□□□ 0.84
Ift88Q61371 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.3■□□□□ 0.84
Ift88Q61371 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ift88Q61371 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ift88Q61371 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Ift88Q61371 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ift88Q61371 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.29■□□□□ 0.84
Ift88Q61371 AC122335.2-201ENSMUST00000213901 6181 ntBASIC20.29■□□□□ 0.84
Ift88Q61371 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Ift88Q61371 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.29■□□□□ 0.84
Ift88Q61371 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.29■□□□□ 0.84
Ift88Q61371 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ift88Q61371 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ift88Q61371 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ift88Q61371 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ift88Q61371 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Ift88Q61371 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ift88Q61371 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Ift88Q61371 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ift88Q61371 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ift88Q61371 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ift88Q61371 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ift88Q61371 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ift88Q61371 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.28■□□□□ 0.84
Ift88Q61371 Gm43060-201ENSMUST00000200621 289 ntBASIC20.28■□□□□ 0.84
Ift88Q61371 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ift88Q61371 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Ift88Q61371 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ift88Q61371 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ift88Q61371 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ift88Q61371 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ift88Q61371 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ift88Q61371 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Ift88Q61371 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ift88Q61371 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Ift88Q61371 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ift88Q61371 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ift88Q61371 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ift88Q61371 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ift88Q61371 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.27■□□□□ 0.84
Ift88Q61371 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Ift88Q61371 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ift88Q61371 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Ift88Q61371 Fst-202ENSMUST00000223640 2612 ntBASIC20.27■□□□□ 0.84
Ift88Q61371 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.27■□□□□ 0.84
Ift88Q61371 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ift88Q61371 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ift88Q61371 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.27■□□□□ 0.84
Ift88Q61371 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.27■□□□□ 0.84
Ift88Q61371 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC20.27■□□□□ 0.84
Ift88Q61371 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
Ift88Q61371 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Ift88Q61371 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Ift88Q61371 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ift88Q61371 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ift88Q61371 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ift88Q61371 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ift88Q61371 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ift88Q61371 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ift88Q61371 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ift88Q61371 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.26■□□□□ 0.83
Ift88Q61371 Gm42900-201ENSMUST00000197184 2167 ntBASIC20.26■□□□□ 0.83
Ift88Q61371 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Ift88Q61371 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ift88Q61371 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ift88Q61371 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ift88Q61371 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ift88Q61371 Gm37811-201ENSMUST00000192416 2601 ntBASIC20.25■□□□□ 0.83
Ift88Q61371 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ift88Q61371 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ift88Q61371 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ift88Q61371 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ift88Q61371 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ift88Q61371 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
Ift88Q61371 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ift88Q61371 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Ift88Q61371 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.25■□□□□ 0.83
Ift88Q61371 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.25■□□□□ 0.83
Ift88Q61371 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
Ift88Q61371 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ift88Q61371 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ift88Q61371 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ift88Q61371 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ift88Q61371 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ift88Q61371 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Ift88Q61371 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ift88Q61371 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Ift88Q61371 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ift88Q61371 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ift88Q61371 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms