Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Gm38027-201ENSMUST00000192315 235 ntBASIC20.76■□□□□ 0.91
Col11a1Q61245 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col11a1Q61245 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Col11a1Q61245 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col11a1Q61245 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col11a1Q61245 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col11a1Q61245 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col11a1Q61245 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Col11a1Q61245 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC20.75■□□□□ 0.91
Col11a1Q61245 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col11a1Q61245 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col11a1Q61245 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col11a1Q61245 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Col11a1Q61245 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Col11a1Q61245 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Col11a1Q61245 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
Col11a1Q61245 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC20.74■□□□□ 0.91
Col11a1Q61245 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col11a1Q61245 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Col11a1Q61245 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC20.74■□□□□ 0.91
Col11a1Q61245 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col11a1Q61245 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col11a1Q61245 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col11a1Q61245 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC20.73■□□□□ 0.91
Col11a1Q61245 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col11a1Q61245 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC20.73■□□□□ 0.91
Col11a1Q61245 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col11a1Q61245 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col11a1Q61245 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col11a1Q61245 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col11a1Q61245 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col11a1Q61245 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col11a1Q61245 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col11a1Q61245 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Col11a1Q61245 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col11a1Q61245 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col11a1Q61245 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Col11a1Q61245 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC20.72■□□□□ 0.91
Col11a1Q61245 Gm4217-201ENSMUST00000182243 1002 ntBASIC20.72■□□□□ 0.91
Col11a1Q61245 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col11a1Q61245 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col11a1Q61245 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col11a1Q61245 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col11a1Q61245 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col11a1Q61245 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col11a1Q61245 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col11a1Q61245 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.71■□□□□ 0.91
Col11a1Q61245 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col11a1Q61245 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC20.71■□□□□ 0.91
Col11a1Q61245 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Col11a1Q61245 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col11a1Q61245 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Col11a1Q61245 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Col11a1Q61245 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC20.71■□□□□ 0.91
Col11a1Q61245 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Col11a1Q61245 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Col11a1Q61245 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col11a1Q61245 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col11a1Q61245 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Col11a1Q61245 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col11a1Q61245 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Col11a1Q61245 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC20.69■□□□□ 0.9
Col11a1Q61245 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Col11a1Q61245 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Col11a1Q61245 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Col11a1Q61245 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col11a1Q61245 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Col11a1Q61245 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col11a1Q61245 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col11a1Q61245 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col11a1Q61245 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col11a1Q61245 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col11a1Q61245 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
Col11a1Q61245 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col11a1Q61245 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col11a1Q61245 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Col11a1Q61245 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col11a1Q61245 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Col11a1Q61245 Mir5130-201ENSMUST00000175160 84 ntBASIC20.68■□□□□ 0.9
Col11a1Q61245 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC20.68■□□□□ 0.9
Col11a1Q61245 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col11a1Q61245 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC20.68■□□□□ 0.9
Col11a1Q61245 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Col11a1Q61245 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col11a1Q61245 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col11a1Q61245 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col11a1Q61245 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Col11a1Q61245 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.68■□□□□ 0.9
Col11a1Q61245 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Col11a1Q61245 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col11a1Q61245 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col11a1Q61245 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col11a1Q61245 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col11a1Q61245 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col11a1Q61245 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col11a1Q61245 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC20.67■□□□□ 0.9
Col11a1Q61245 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC20.67■□□□□ 0.9
Col11a1Q61245 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Col11a1Q61245 Gm2274-201ENSMUST00000184539 609 ntBASIC20.67■□□□□ 0.9
Col11a1Q61245 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms