Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim38Q5SZ99 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trim38Q5SZ99 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.02■□□□□ 0.64
Trim38Q5SZ99 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.02■□□□□ 0.64
Trim38Q5SZ99 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Trim38Q5SZ99 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
Trim38Q5SZ99 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim38Q5SZ99 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trim38Q5SZ99 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trim38Q5SZ99 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trim38Q5SZ99 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.02■□□□□ 0.63
Trim38Q5SZ99 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trim38Q5SZ99 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trim38Q5SZ99 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trim38Q5SZ99 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trim38Q5SZ99 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim38Q5SZ99 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim38Q5SZ99 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.01■□□□□ 0.63
Trim38Q5SZ99 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim38Q5SZ99 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
Trim38Q5SZ99 Nespas-201ENSMUST00000143738 1083 ntBASIC19.01■□□□□ 0.63
Trim38Q5SZ99 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim38Q5SZ99 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.01■□□□□ 0.63
Trim38Q5SZ99 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
Trim38Q5SZ99 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim38Q5SZ99 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim38Q5SZ99 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim38Q5SZ99 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim38Q5SZ99 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim38Q5SZ99 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim38Q5SZ99 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Trim38Q5SZ99 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trim38Q5SZ99 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19■□□□□ 0.63
Trim38Q5SZ99 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trim38Q5SZ99 AV356131-201ENSMUST00000206201 750 ntBASIC19■□□□□ 0.63
Trim38Q5SZ99 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim38Q5SZ99 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19■□□□□ 0.63
Trim38Q5SZ99 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim38Q5SZ99 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trim38Q5SZ99 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim38Q5SZ99 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Trim38Q5SZ99 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Trim38Q5SZ99 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim38Q5SZ99 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trim38Q5SZ99 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trim38Q5SZ99 Gm18284-201ENSMUST00000172604 624 ntBASIC18.99■□□□□ 0.63
Trim38Q5SZ99 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim38Q5SZ99 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.99■□□□□ 0.63
Trim38Q5SZ99 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim38Q5SZ99 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Trim38Q5SZ99 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim38Q5SZ99 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Trim38Q5SZ99 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim38Q5SZ99 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim38Q5SZ99 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim38Q5SZ99 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim38Q5SZ99 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim38Q5SZ99 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Trim38Q5SZ99 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.98■□□□□ 0.63
Trim38Q5SZ99 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trim38Q5SZ99 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trim38Q5SZ99 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim38Q5SZ99 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim38Q5SZ99 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.97■□□□□ 0.63
Trim38Q5SZ99 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.97■□□□□ 0.63
Trim38Q5SZ99 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim38Q5SZ99 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim38Q5SZ99 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.97■□□□□ 0.63
Trim38Q5SZ99 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim38Q5SZ99 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Trim38Q5SZ99 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.97■□□□□ 0.63
Trim38Q5SZ99 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
Trim38Q5SZ99 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim38Q5SZ99 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Trim38Q5SZ99 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Trim38Q5SZ99 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim38Q5SZ99 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim38Q5SZ99 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim38Q5SZ99 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim38Q5SZ99 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
Trim38Q5SZ99 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim38Q5SZ99 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.96■□□□□ 0.63
Trim38Q5SZ99 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim38Q5SZ99 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim38Q5SZ99 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Trim38Q5SZ99 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim38Q5SZ99 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Trim38Q5SZ99 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim38Q5SZ99 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Trim38Q5SZ99 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.96■□□□□ 0.63
Trim38Q5SZ99 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim38Q5SZ99 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trim38Q5SZ99 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim38Q5SZ99 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Trim38Q5SZ99 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim38Q5SZ99 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trim38Q5SZ99 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim38Q5SZ99 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.95■□□□□ 0.62
Trim38Q5SZ99 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim38Q5SZ99 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms