Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7d-3Q5R1I1 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7d-3Q5R1I1 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7d-3Q5R1I1 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trav7d-3Q5R1I1 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7d-3Q5R1I1 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7d-3Q5R1I1 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav7d-3Q5R1I1 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav7d-3Q5R1I1 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav7d-3Q5R1I1 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav7d-3Q5R1I1 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav7d-3Q5R1I1 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav7d-3Q5R1I1 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav7d-3Q5R1I1 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav7d-3Q5R1I1 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav7d-3Q5R1I1 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav7d-3Q5R1I1 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav7d-3Q5R1I1 Gm43060-201ENSMUST00000200621 289 ntBASIC13.46□□□□□ -0.25
Trav7d-3Q5R1I1 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC13.46□□□□□ -0.25
Trav7d-3Q5R1I1 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav7d-3Q5R1I1 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav7d-3Q5R1I1 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav7d-3Q5R1I1 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC13.46□□□□□ -0.25
Trav7d-3Q5R1I1 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Trav7d-3Q5R1I1 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Trav7d-3Q5R1I1 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC13.46□□□□□ -0.26
Trav7d-3Q5R1I1 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Trav7d-3Q5R1I1 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav7d-3Q5R1I1 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav7d-3Q5R1I1 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7d-3Q5R1I1 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7d-3Q5R1I1 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7d-3Q5R1I1 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trav7d-3Q5R1I1 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7d-3Q5R1I1 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7d-3Q5R1I1 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7d-3Q5R1I1 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav7d-3Q5R1I1 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC13.45□□□□□ -0.26
Trav7d-3Q5R1I1 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7d-3Q5R1I1 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7d-3Q5R1I1 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7d-3Q5R1I1 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7d-3Q5R1I1 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7d-3Q5R1I1 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7d-3Q5R1I1 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7d-3Q5R1I1 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7d-3Q5R1I1 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7d-3Q5R1I1 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Trav7d-3Q5R1I1 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7d-3Q5R1I1 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7d-3Q5R1I1 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7d-3Q5R1I1 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7d-3Q5R1I1 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7d-3Q5R1I1 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7d-3Q5R1I1 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Trav7d-3Q5R1I1 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Trav7d-3Q5R1I1 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7d-3Q5R1I1 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7d-3Q5R1I1 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7d-3Q5R1I1 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav7d-3Q5R1I1 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC13.44□□□□□ -0.26
Trav7d-3Q5R1I1 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7d-3Q5R1I1 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7d-3Q5R1I1 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7d-3Q5R1I1 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7d-3Q5R1I1 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trav7d-3Q5R1I1 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7d-3Q5R1I1 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7d-3Q5R1I1 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7d-3Q5R1I1 Grk6-206ENSMUST00000224995 2971 ntBASIC13.44□□□□□ -0.26
Trav7d-3Q5R1I1 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7d-3Q5R1I1 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7d-3Q5R1I1 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7d-3Q5R1I1 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7d-3Q5R1I1 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7d-3Q5R1I1 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7d-3Q5R1I1 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7d-3Q5R1I1 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Trav7d-3Q5R1I1 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7d-3Q5R1I1 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7d-3Q5R1I1 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7d-3Q5R1I1 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7d-3Q5R1I1 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC13.43□□□□□ -0.26
Trav7d-3Q5R1I1 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC13.43□□□□□ -0.26
Trav7d-3Q5R1I1 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7d-3Q5R1I1 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7d-3Q5R1I1 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7d-3Q5R1I1 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7d-3Q5R1I1 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7d-3Q5R1I1 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7d-3Q5R1I1 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Trav7d-3Q5R1I1 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7d-3Q5R1I1 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7d-3Q5R1I1 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7d-3Q5R1I1 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7d-3Q5R1I1 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trav7d-3Q5R1I1 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trav7d-3Q5R1I1 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7d-3Q5R1I1 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7d-3Q5R1I1 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms