Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6d-4Q5R1I0 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Trav6d-4Q5R1I0 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6d-4Q5R1I0 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC15.41■□□□□ 0.06
Trav6d-4Q5R1I0 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC15.41■□□□□ 0.06
Trav6d-4Q5R1I0 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6d-4Q5R1I0 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC15.41■□□□□ 0.06
Trav6d-4Q5R1I0 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6d-4Q5R1I0 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6d-4Q5R1I0 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6d-4Q5R1I0 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6d-4Q5R1I0 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6d-4Q5R1I0 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6d-4Q5R1I0 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6d-4Q5R1I0 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6d-4Q5R1I0 Gm2399-201ENSMUST00000104944 225 ntBASIC15.4■□□□□ 0.06
Trav6d-4Q5R1I0 Gm27275-201ENSMUST00000184318 272 ntBASIC15.4■□□□□ 0.06
Trav6d-4Q5R1I0 Gm44878-201ENSMUST00000205812 1295 ntBASIC15.4■□□□□ 0.06
Trav6d-4Q5R1I0 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6d-4Q5R1I0 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6d-4Q5R1I0 Dio3-201ENSMUST00000097228 1449 ntBASIC15.4■□□□□ 0.06
Trav6d-4Q5R1I0 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6d-4Q5R1I0 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC15.4■□□□□ 0.06
Trav6d-4Q5R1I0 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
Trav6d-4Q5R1I0 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6d-4Q5R1I0 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC15.39■□□□□ 0.05
Trav6d-4Q5R1I0 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Trav6d-4Q5R1I0 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC15.39■□□□□ 0.05
Trav6d-4Q5R1I0 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Trav6d-4Q5R1I0 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6d-4Q5R1I0 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6d-4Q5R1I0 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trav6d-4Q5R1I0 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6d-4Q5R1I0 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6d-4Q5R1I0 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC15.39■□□□□ 0.05
Trav6d-4Q5R1I0 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC15.39■□□□□ 0.05
Trav6d-4Q5R1I0 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC15.39■□□□□ 0.05
Trav6d-4Q5R1I0 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Trav6d-4Q5R1I0 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC15.39■□□□□ 0.05
Trav6d-4Q5R1I0 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC15.39■□□□□ 0.05
Trav6d-4Q5R1I0 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6d-4Q5R1I0 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6d-4Q5R1I0 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6d-4Q5R1I0 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6d-4Q5R1I0 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6d-4Q5R1I0 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC15.39■□□□□ 0.05
Trav6d-4Q5R1I0 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6d-4Q5R1I0 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Trav6d-4Q5R1I0 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6d-4Q5R1I0 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6d-4Q5R1I0 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6d-4Q5R1I0 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6d-4Q5R1I0 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6d-4Q5R1I0 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6d-4Q5R1I0 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6d-4Q5R1I0 Gm15847-201ENSMUST00000121417 1065 ntBASIC15.38■□□□□ 0.05
Trav6d-4Q5R1I0 Gm8520-201ENSMUST00000186517 868 ntBASIC15.38■□□□□ 0.05
Trav6d-4Q5R1I0 Gm37805-201ENSMUST00000192612 1094 ntBASIC15.38■□□□□ 0.05
Trav6d-4Q5R1I0 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC15.38■□□□□ 0.05
Trav6d-4Q5R1I0 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Trav6d-4Q5R1I0 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6d-4Q5R1I0 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6d-4Q5R1I0 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
Trav6d-4Q5R1I0 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6d-4Q5R1I0 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6d-4Q5R1I0 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.38■□□□□ 0.05
Trav6d-4Q5R1I0 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6d-4Q5R1I0 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6d-4Q5R1I0 Gm9885-202ENSMUST00000186234 2209 ntBASIC15.37■□□□□ 0.05
Trav6d-4Q5R1I0 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trav6d-4Q5R1I0 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.37■□□□□ 0.05
Trav6d-4Q5R1I0 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Trav6d-4Q5R1I0 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6d-4Q5R1I0 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Trav6d-4Q5R1I0 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6d-4Q5R1I0 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6d-4Q5R1I0 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6d-4Q5R1I0 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Trav6d-4Q5R1I0 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6d-4Q5R1I0 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6d-4Q5R1I0 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6d-4Q5R1I0 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trav6d-4Q5R1I0 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6d-4Q5R1I0 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC15.36■□□□□ 0.05
Trav6d-4Q5R1I0 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6d-4Q5R1I0 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6d-4Q5R1I0 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC15.36■□□□□ 0.05
Trav6d-4Q5R1I0 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6d-4Q5R1I0 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6d-4Q5R1I0 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Trav6d-4Q5R1I0 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6d-4Q5R1I0 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6d-4Q5R1I0 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6d-4Q5R1I0 Gm13168-201ENSMUST00000121771 632 ntBASIC15.36■□□□□ 0.05
Trav6d-4Q5R1I0 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6d-4Q5R1I0 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6d-4Q5R1I0 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC15.36■□□□□ 0.05
Trav6d-4Q5R1I0 AC107452.1-201ENSMUST00000227963 481 ntBASIC15.36■□□□□ 0.05
Trav6d-4Q5R1I0 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC15.36■□□□□ 0.05
Trav6d-4Q5R1I0 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms