Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn2bQ56A07 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn2bQ56A07 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn2bQ56A07 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn2bQ56A07 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.15■□□□□ 0.5
Scn2bQ56A07 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Scn2bQ56A07 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn2bQ56A07 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.15■□□□□ 0.5
Scn2bQ56A07 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn2bQ56A07 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn2bQ56A07 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn2bQ56A07 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Scn2bQ56A07 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn2bQ56A07 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn2bQ56A07 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn2bQ56A07 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn2bQ56A07 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Scn2bQ56A07 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scn2bQ56A07 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Scn2bQ56A07 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Scn2bQ56A07 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scn2bQ56A07 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Scn2bQ56A07 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Scn2bQ56A07 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Scn2bQ56A07 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.14■□□□□ 0.49
Scn2bQ56A07 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.14■□□□□ 0.49
Scn2bQ56A07 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scn2bQ56A07 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.14■□□□□ 0.49
Scn2bQ56A07 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scn2bQ56A07 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Scn2bQ56A07 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scn2bQ56A07 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scn2bQ56A07 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scn2bQ56A07 Fst-202ENSMUST00000223640 2612 ntBASIC18.14■□□□□ 0.49
Scn2bQ56A07 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Scn2bQ56A07 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.14■□□□□ 0.49
Scn2bQ56A07 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn2bQ56A07 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Scn2bQ56A07 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Scn2bQ56A07 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Scn2bQ56A07 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn2bQ56A07 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Scn2bQ56A07 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn2bQ56A07 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Scn2bQ56A07 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn2bQ56A07 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Scn2bQ56A07 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Scn2bQ56A07 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn2bQ56A07 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn2bQ56A07 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn2bQ56A07 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Scn2bQ56A07 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn2bQ56A07 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Scn2bQ56A07 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Scn2bQ56A07 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.12■□□□□ 0.49
Scn2bQ56A07 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
Scn2bQ56A07 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Scn2bQ56A07 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Scn2bQ56A07 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn2bQ56A07 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn2bQ56A07 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn2bQ56A07 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Scn2bQ56A07 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn2bQ56A07 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.12■□□□□ 0.49
Scn2bQ56A07 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn2bQ56A07 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn2bQ56A07 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Scn2bQ56A07 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Scn2bQ56A07 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.11■□□□□ 0.49
Scn2bQ56A07 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.11■□□□□ 0.49
Scn2bQ56A07 Gm42642-201ENSMUST00000200683 355 ntBASIC18.11■□□□□ 0.49
Scn2bQ56A07 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn2bQ56A07 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn2bQ56A07 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.11■□□□□ 0.49
Scn2bQ56A07 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.11■□□□□ 0.49
Scn2bQ56A07 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn2bQ56A07 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Scn2bQ56A07 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.11■□□□□ 0.49
Scn2bQ56A07 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn2bQ56A07 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.11■□□□□ 0.49
Scn2bQ56A07 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn2bQ56A07 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.11■□□□□ 0.49
Scn2bQ56A07 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn2bQ56A07 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn2bQ56A07 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.1■□□□□ 0.49
Scn2bQ56A07 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn2bQ56A07 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn2bQ56A07 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Scn2bQ56A07 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Scn2bQ56A07 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn2bQ56A07 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.1■□□□□ 0.49
Scn2bQ56A07 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn2bQ56A07 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn2bQ56A07 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn2bQ56A07 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn2bQ56A07 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn2bQ56A07 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
Scn2bQ56A07 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Scn2bQ56A07 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn2bQ56A07 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms