Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Herc2Q4U2R1 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Herc2Q4U2R1 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Herc2Q4U2R1 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Herc2Q4U2R1 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Herc2Q4U2R1 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Herc2Q4U2R1 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Herc2Q4U2R1 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC11.03□□□□□ -0.64
Herc2Q4U2R1 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Herc2Q4U2R1 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Herc2Q4U2R1 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Herc2Q4U2R1 Gm16061-201ENSMUST00000122167 857 ntBASIC11.03□□□□□ -0.64
Herc2Q4U2R1 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
Herc2Q4U2R1 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Herc2Q4U2R1 Gm6736-201ENSMUST00000166583 948 ntBASIC11.03□□□□□ -0.64
Herc2Q4U2R1 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Herc2Q4U2R1 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC11.03□□□□□ -0.64
Herc2Q4U2R1 CT943659.1-201ENSMUST00000215459 326 ntBASIC11.03□□□□□ -0.64
Herc2Q4U2R1 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Herc2Q4U2R1 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Herc2Q4U2R1 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Herc2Q4U2R1 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC11.03□□□□□ -0.64
Herc2Q4U2R1 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Herc2Q4U2R1 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC11.02□□□□□ -0.64
Herc2Q4U2R1 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Herc2Q4U2R1 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Herc2Q4U2R1 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC11.02□□□□□ -0.65
Herc2Q4U2R1 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Herc2Q4U2R1 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Herc2Q4U2R1 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC11.02□□□□□ -0.65
Herc2Q4U2R1 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC11.02□□□□□ -0.65
Herc2Q4U2R1 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Herc2Q4U2R1 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Herc2Q4U2R1 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Herc2Q4U2R1 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Herc2Q4U2R1 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC11.02□□□□□ -0.65
Herc2Q4U2R1 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Herc2Q4U2R1 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
Herc2Q4U2R1 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Herc2Q4U2R1 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC11.01□□□□□ -0.65
Herc2Q4U2R1 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Herc2Q4U2R1 Zfp783-201ENSMUST00000095946 670 ntBASIC11.01□□□□□ -0.65
Herc2Q4U2R1 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Herc2Q4U2R1 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Herc2Q4U2R1 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC11.01□□□□□ -0.65
Herc2Q4U2R1 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Herc2Q4U2R1 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Herc2Q4U2R1 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC11.01□□□□□ -0.65
Herc2Q4U2R1 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Herc2Q4U2R1 Mir1668-201ENSMUST00000184114 107 ntBASIC11.01□□□□□ -0.65
Herc2Q4U2R1 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Herc2Q4U2R1 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Herc2Q4U2R1 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Herc2Q4U2R1 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Herc2Q4U2R1 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Herc2Q4U2R1 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Herc2Q4U2R1 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC11.01□□□□□ -0.65
Herc2Q4U2R1 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC11.01□□□□□ -0.65
Herc2Q4U2R1 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC11.01□□□□□ -0.65
Herc2Q4U2R1 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
Herc2Q4U2R1 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Herc2Q4U2R1 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Herc2Q4U2R1 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Herc2Q4U2R1 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Herc2Q4U2R1 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Herc2Q4U2R1 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC11□□□□□ -0.65
Herc2Q4U2R1 Gm3272-201ENSMUST00000181181 1229 ntBASIC11□□□□□ -0.65
Herc2Q4U2R1 Bloc1s5-203ENSMUST00000224902 612 ntBASIC11□□□□□ -0.65
Herc2Q4U2R1 Gm10566-201ENSMUST00000086739 996 ntBASIC11□□□□□ -0.65
Herc2Q4U2R1 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Herc2Q4U2R1 Spsb2-203ENSMUST00000112473 1322 ntBASIC11□□□□□ -0.65
Herc2Q4U2R1 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Herc2Q4U2R1 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Herc2Q4U2R1 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Herc2Q4U2R1 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Herc2Q4U2R1 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC11□□□□□ -0.65
Herc2Q4U2R1 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Herc2Q4U2R1 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
Herc2Q4U2R1 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC11□□□□□ -0.65
Herc2Q4U2R1 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC11□□□□□ -0.65
Herc2Q4U2R1 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Herc2Q4U2R1 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
Herc2Q4U2R1 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Herc2Q4U2R1 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Herc2Q4U2R1 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Herc2Q4U2R1 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Herc2Q4U2R1 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC11□□□□□ -0.65
Herc2Q4U2R1 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Herc2Q4U2R1 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
Herc2Q4U2R1 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC10.99□□□□□ -0.65
Herc2Q4U2R1 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC10.99□□□□□ -0.65
Herc2Q4U2R1 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Herc2Q4U2R1 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Herc2Q4U2R1 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Herc2Q4U2R1 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Herc2Q4U2R1 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Herc2Q4U2R1 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Herc2Q4U2R1 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC10.99□□□□□ -0.65
Herc2Q4U2R1 Gm42670-201ENSMUST00000201816 1292 ntBASIC10.99□□□□□ -0.65
Herc2Q4U2R1 Gm7213-201ENSMUST00000215977 950 ntBASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms