Protein–RNA interactions for Protein: Q3U3V8

Xrra1, X-ray radiation resistance-associated protein 1, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrra1Q3U3V8 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Xrra1Q3U3V8 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Xrra1Q3U3V8 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Xrra1Q3U3V8 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.51■□□□□ 0.39
Xrra1Q3U3V8 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Xrra1Q3U3V8 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Xrra1Q3U3V8 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Xrra1Q3U3V8 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Xrra1Q3U3V8 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Xrra1Q3U3V8 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Xrra1Q3U3V8 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Xrra1Q3U3V8 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Xrra1Q3U3V8 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Xrra1Q3U3V8 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Xrra1Q3U3V8 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.5■□□□□ 0.39
Xrra1Q3U3V8 Gm6420-201ENSMUST00000193885 723 ntBASIC17.5■□□□□ 0.39
Xrra1Q3U3V8 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Xrra1Q3U3V8 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Xrra1Q3U3V8 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Xrra1Q3U3V8 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.5■□□□□ 0.39
Xrra1Q3U3V8 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Xrra1Q3U3V8 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Xrra1Q3U3V8 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Xrra1Q3U3V8 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Xrra1Q3U3V8 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.49■□□□□ 0.39
Xrra1Q3U3V8 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Xrra1Q3U3V8 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Xrra1Q3U3V8 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Xrra1Q3U3V8 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Xrra1Q3U3V8 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Xrra1Q3U3V8 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Xrra1Q3U3V8 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Xrra1Q3U3V8 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Xrra1Q3U3V8 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Xrra1Q3U3V8 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Xrra1Q3U3V8 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Xrra1Q3U3V8 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Xrra1Q3U3V8 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Xrra1Q3U3V8 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Xrra1Q3U3V8 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Xrra1Q3U3V8 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.48■□□□□ 0.39
Xrra1Q3U3V8 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Xrra1Q3U3V8 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Xrra1Q3U3V8 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Xrra1Q3U3V8 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Xrra1Q3U3V8 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Xrra1Q3U3V8 Gm12933-201ENSMUST00000120203 872 ntBASIC17.48■□□□□ 0.39
Xrra1Q3U3V8 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.48■□□□□ 0.39
Xrra1Q3U3V8 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Xrra1Q3U3V8 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.48■□□□□ 0.39
Xrra1Q3U3V8 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Xrra1Q3U3V8 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Xrra1Q3U3V8 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Xrra1Q3U3V8 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.47■□□□□ 0.39
Xrra1Q3U3V8 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Xrra1Q3U3V8 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Xrra1Q3U3V8 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Xrra1Q3U3V8 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Xrra1Q3U3V8 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Xrra1Q3U3V8 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Xrra1Q3U3V8 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Xrra1Q3U3V8 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Xrra1Q3U3V8 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Xrra1Q3U3V8 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Xrra1Q3U3V8 Nespas-201ENSMUST00000143738 1083 ntBASIC17.47■□□□□ 0.39
Xrra1Q3U3V8 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.47■□□□□ 0.39
Xrra1Q3U3V8 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.47■□□□□ 0.39
Xrra1Q3U3V8 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Xrra1Q3U3V8 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Xrra1Q3U3V8 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Xrra1Q3U3V8 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Xrra1Q3U3V8 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.47■□□□□ 0.39
Xrra1Q3U3V8 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.47■□□□□ 0.39
Xrra1Q3U3V8 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Xrra1Q3U3V8 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Xrra1Q3U3V8 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Xrra1Q3U3V8 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Xrra1Q3U3V8 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.46■□□□□ 0.39
Xrra1Q3U3V8 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Xrra1Q3U3V8 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.46■□□□□ 0.39
Xrra1Q3U3V8 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Xrra1Q3U3V8 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Xrra1Q3U3V8 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Xrra1Q3U3V8 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Xrra1Q3U3V8 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Xrra1Q3U3V8 Gm7290-201ENSMUST00000104990 617 ntBASIC17.46■□□□□ 0.39
Xrra1Q3U3V8 Gm12918-201ENSMUST00000120234 636 ntBASIC17.46■□□□□ 0.39
Xrra1Q3U3V8 Gm15710-201ENSMUST00000121821 636 ntBASIC17.46■□□□□ 0.39
Xrra1Q3U3V8 Gm5075-201ENSMUST00000196916 622 ntBASIC17.46■□□□□ 0.39
Xrra1Q3U3V8 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Xrra1Q3U3V8 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.46■□□□□ 0.39
Xrra1Q3U3V8 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.46■□□□□ 0.39
Xrra1Q3U3V8 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Xrra1Q3U3V8 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.46■□□□□ 0.39
Xrra1Q3U3V8 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Xrra1Q3U3V8 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Xrra1Q3U3V8 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.46■□□□□ 0.39
Xrra1Q3U3V8 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.46■□□□□ 0.39
Xrra1Q3U3V8 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Xrra1Q3U3V8 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.46■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms