Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ctdnep1Q3TP92 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ctdnep1Q3TP92 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
Ctdnep1Q3TP92 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ctdnep1Q3TP92 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ctdnep1Q3TP92 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC21.22■□□□□ 0.99
Ctdnep1Q3TP92 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Ctdnep1Q3TP92 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ctdnep1Q3TP92 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ctdnep1Q3TP92 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC21.22■□□□□ 0.99
Ctdnep1Q3TP92 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ctdnep1Q3TP92 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Ctdnep1Q3TP92 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ctdnep1Q3TP92 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC21.22■□□□□ 0.99
Ctdnep1Q3TP92 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC21.21■□□□□ 0.99
Ctdnep1Q3TP92 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Ctdnep1Q3TP92 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ctdnep1Q3TP92 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC21.21■□□□□ 0.99
Ctdnep1Q3TP92 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC21.21■□□□□ 0.99
Ctdnep1Q3TP92 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ctdnep1Q3TP92 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC21.21■□□□□ 0.99
Ctdnep1Q3TP92 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC21.21■□□□□ 0.99
Ctdnep1Q3TP92 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ctdnep1Q3TP92 Gm5828-201ENSMUST00000071842 1860 ntBASIC21.21■□□□□ 0.99
Ctdnep1Q3TP92 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ctdnep1Q3TP92 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.21■□□□□ 0.99
Ctdnep1Q3TP92 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ctdnep1Q3TP92 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ctdnep1Q3TP92 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ctdnep1Q3TP92 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ctdnep1Q3TP92 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC21.2■□□□□ 0.98
Ctdnep1Q3TP92 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Ctdnep1Q3TP92 Gm6365-201ENSMUST00000054711 744 ntBASIC21.2■□□□□ 0.98
Ctdnep1Q3TP92 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ctdnep1Q3TP92 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ctdnep1Q3TP92 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ctdnep1Q3TP92 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ctdnep1Q3TP92 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ctdnep1Q3TP92 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ctdnep1Q3TP92 Tgds-204ENSMUST00000228543 1594 ntBASIC21.19■□□□□ 0.98
Ctdnep1Q3TP92 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Ctdnep1Q3TP92 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ctdnep1Q3TP92 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ctdnep1Q3TP92 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC21.19■□□□□ 0.98
Ctdnep1Q3TP92 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC21.19■□□□□ 0.98
Ctdnep1Q3TP92 Gm42555-201ENSMUST00000199304 1039 ntBASIC21.19■□□□□ 0.98
Ctdnep1Q3TP92 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Ctdnep1Q3TP92 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ctdnep1Q3TP92 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ctdnep1Q3TP92 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ctdnep1Q3TP92 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC21.19■□□□□ 0.98
Ctdnep1Q3TP92 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ctdnep1Q3TP92 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ctdnep1Q3TP92 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ctdnep1Q3TP92 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ctdnep1Q3TP92 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ctdnep1Q3TP92 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ctdnep1Q3TP92 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ctdnep1Q3TP92 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Ctdnep1Q3TP92 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ctdnep1Q3TP92 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ctdnep1Q3TP92 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ctdnep1Q3TP92 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ctdnep1Q3TP92 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ctdnep1Q3TP92 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ctdnep1Q3TP92 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ctdnep1Q3TP92 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ctdnep1Q3TP92 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC21.18■□□□□ 0.98
Ctdnep1Q3TP92 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Ctdnep1Q3TP92 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ctdnep1Q3TP92 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Ctdnep1Q3TP92 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ctdnep1Q3TP92 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ctdnep1Q3TP92 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ctdnep1Q3TP92 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
Ctdnep1Q3TP92 Gm22325-201ENSMUST00000158904 308 ntBASIC21.17■□□□□ 0.98
Ctdnep1Q3TP92 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ctdnep1Q3TP92 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ctdnep1Q3TP92 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ctdnep1Q3TP92 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ctdnep1Q3TP92 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ctdnep1Q3TP92 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Ctdnep1Q3TP92 Gm38345-201ENSMUST00000192635 1748 ntBASIC21.16■□□□□ 0.98
Ctdnep1Q3TP92 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Ctdnep1Q3TP92 Gm37563-201ENSMUST00000192580 1513 ntBASIC21.16■□□□□ 0.98
Ctdnep1Q3TP92 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ctdnep1Q3TP92 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ctdnep1Q3TP92 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ctdnep1Q3TP92 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ctdnep1Q3TP92 Gm7291-201ENSMUST00000199147 382 ntBASIC21.16■□□□□ 0.98
Ctdnep1Q3TP92 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Ctdnep1Q3TP92 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ctdnep1Q3TP92 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ctdnep1Q3TP92 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ctdnep1Q3TP92 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ctdnep1Q3TP92 Gm27405-201ENSMUST00000184201 112 ntBASIC21.15■□□□□ 0.98
Ctdnep1Q3TP92 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ctdnep1Q3TP92 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ctdnep1Q3TP92 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ctdnep1Q3TP92 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms