Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Khdc4Q3TCX3 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Khdc4Q3TCX3 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Khdc4Q3TCX3 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Khdc4Q3TCX3 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Khdc4Q3TCX3 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Khdc4Q3TCX3 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Khdc4Q3TCX3 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Khdc4Q3TCX3 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Khdc4Q3TCX3 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Khdc4Q3TCX3 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Khdc4Q3TCX3 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Khdc4Q3TCX3 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Khdc4Q3TCX3 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Khdc4Q3TCX3 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Khdc4Q3TCX3 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Khdc4Q3TCX3 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Khdc4Q3TCX3 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Khdc4Q3TCX3 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Khdc4Q3TCX3 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.41■□□□□ 0.38
Khdc4Q3TCX3 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Khdc4Q3TCX3 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Khdc4Q3TCX3 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.41■□□□□ 0.38
Khdc4Q3TCX3 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.41■□□□□ 0.38
Khdc4Q3TCX3 Rab3c-203ENSMUST00000224180 967 ntBASIC17.41■□□□□ 0.38
Khdc4Q3TCX3 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.41■□□□□ 0.38
Khdc4Q3TCX3 Golph3-205ENSMUST00000228671 2842 ntBASIC17.41■□□□□ 0.38
Khdc4Q3TCX3 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Khdc4Q3TCX3 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Khdc4Q3TCX3 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Khdc4Q3TCX3 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Khdc4Q3TCX3 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Khdc4Q3TCX3 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Khdc4Q3TCX3 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Khdc4Q3TCX3 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.4■□□□□ 0.38
Khdc4Q3TCX3 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Khdc4Q3TCX3 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Khdc4Q3TCX3 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.4■□□□□ 0.38
Khdc4Q3TCX3 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Khdc4Q3TCX3 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.4■□□□□ 0.38
Khdc4Q3TCX3 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.4■□□□□ 0.38
Khdc4Q3TCX3 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Khdc4Q3TCX3 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Khdc4Q3TCX3 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Khdc4Q3TCX3 Gm10812-201ENSMUST00000099864 546 ntBASIC17.4■□□□□ 0.38
Khdc4Q3TCX3 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Khdc4Q3TCX3 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Khdc4Q3TCX3 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.4■□□□□ 0.38
Khdc4Q3TCX3 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Khdc4Q3TCX3 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.4■□□□□ 0.38
Khdc4Q3TCX3 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Khdc4Q3TCX3 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Khdc4Q3TCX3 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Khdc4Q3TCX3 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Khdc4Q3TCX3 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Khdc4Q3TCX3 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Khdc4Q3TCX3 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Khdc4Q3TCX3 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Khdc4Q3TCX3 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Khdc4Q3TCX3 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Khdc4Q3TCX3 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Khdc4Q3TCX3 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Khdc4Q3TCX3 Gm26524-201ENSMUST00000192339 390 ntBASIC17.39■□□□□ 0.37
Khdc4Q3TCX3 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.39■□□□□ 0.37
Khdc4Q3TCX3 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.39■□□□□ 0.37
Khdc4Q3TCX3 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Khdc4Q3TCX3 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Khdc4Q3TCX3 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Khdc4Q3TCX3 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Khdc4Q3TCX3 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Khdc4Q3TCX3 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
Khdc4Q3TCX3 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
Khdc4Q3TCX3 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Khdc4Q3TCX3 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Khdc4Q3TCX3 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.38■□□□□ 0.37
Khdc4Q3TCX3 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Khdc4Q3TCX3 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.38■□□□□ 0.37
Khdc4Q3TCX3 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Khdc4Q3TCX3 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Khdc4Q3TCX3 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.38■□□□□ 0.37
Khdc4Q3TCX3 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Khdc4Q3TCX3 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Khdc4Q3TCX3 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Khdc4Q3TCX3 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Khdc4Q3TCX3 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Khdc4Q3TCX3 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Khdc4Q3TCX3 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Khdc4Q3TCX3 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Khdc4Q3TCX3 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Khdc4Q3TCX3 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Khdc4Q3TCX3 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Khdc4Q3TCX3 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Khdc4Q3TCX3 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Khdc4Q3TCX3 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Khdc4Q3TCX3 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Khdc4Q3TCX3 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.37■□□□□ 0.37
Khdc4Q3TCX3 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Khdc4Q3TCX3 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.37■□□□□ 0.37
Khdc4Q3TCX3 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Khdc4Q3TCX3 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms