Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ptchd3Q0EEE2 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ptchd3Q0EEE2 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ptchd3Q0EEE2 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.67■□□□□ 0.42
Ptchd3Q0EEE2 Gm26833-201ENSMUST00000180899 440 ntBASIC17.67■□□□□ 0.42
Ptchd3Q0EEE2 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.67■□□□□ 0.42
Ptchd3Q0EEE2 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ptchd3Q0EEE2 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ptchd3Q0EEE2 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Ptchd3Q0EEE2 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ptchd3Q0EEE2 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ptchd3Q0EEE2 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ptchd3Q0EEE2 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ptchd3Q0EEE2 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Ptchd3Q0EEE2 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ptchd3Q0EEE2 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ptchd3Q0EEE2 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ptchd3Q0EEE2 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.67■□□□□ 0.42
Ptchd3Q0EEE2 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ptchd3Q0EEE2 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ptchd3Q0EEE2 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ptchd3Q0EEE2 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ptchd3Q0EEE2 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ptchd3Q0EEE2 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ptchd3Q0EEE2 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.66■□□□□ 0.42
Ptchd3Q0EEE2 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ptchd3Q0EEE2 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.66■□□□□ 0.42
Ptchd3Q0EEE2 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ptchd3Q0EEE2 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.66■□□□□ 0.42
Ptchd3Q0EEE2 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ptchd3Q0EEE2 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ptchd3Q0EEE2 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Ptchd3Q0EEE2 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ptchd3Q0EEE2 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ptchd3Q0EEE2 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.66■□□□□ 0.42
Ptchd3Q0EEE2 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ptchd3Q0EEE2 Fst-202ENSMUST00000223640 2612 ntBASIC17.66■□□□□ 0.42
Ptchd3Q0EEE2 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ptchd3Q0EEE2 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ptchd3Q0EEE2 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ptchd3Q0EEE2 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ptchd3Q0EEE2 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ptchd3Q0EEE2 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ptchd3Q0EEE2 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ptchd3Q0EEE2 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ptchd3Q0EEE2 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ptchd3Q0EEE2 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.65■□□□□ 0.42
Ptchd3Q0EEE2 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Ptchd3Q0EEE2 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ptchd3Q0EEE2 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
Ptchd3Q0EEE2 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ptchd3Q0EEE2 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.65■□□□□ 0.42
Ptchd3Q0EEE2 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ptchd3Q0EEE2 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Ptchd3Q0EEE2 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ptchd3Q0EEE2 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ptchd3Q0EEE2 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ptchd3Q0EEE2 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.65■□□□□ 0.42
Ptchd3Q0EEE2 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ptchd3Q0EEE2 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ptchd3Q0EEE2 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Ptchd3Q0EEE2 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ptchd3Q0EEE2 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.65■□□□□ 0.42
Ptchd3Q0EEE2 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ptchd3Q0EEE2 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
Ptchd3Q0EEE2 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ptchd3Q0EEE2 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ptchd3Q0EEE2 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Ptchd3Q0EEE2 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ptchd3Q0EEE2 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ptchd3Q0EEE2 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ptchd3Q0EEE2 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ptchd3Q0EEE2 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Ptchd3Q0EEE2 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.64■□□□□ 0.41
Ptchd3Q0EEE2 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Ptchd3Q0EEE2 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Ptchd3Q0EEE2 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.64■□□□□ 0.41
Ptchd3Q0EEE2 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ptchd3Q0EEE2 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ptchd3Q0EEE2 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ptchd3Q0EEE2 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ptchd3Q0EEE2 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ptchd3Q0EEE2 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ptchd3Q0EEE2 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ptchd3Q0EEE2 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ptchd3Q0EEE2 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Ptchd3Q0EEE2 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.63■□□□□ 0.41
Ptchd3Q0EEE2 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ptchd3Q0EEE2 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Ptchd3Q0EEE2 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ptchd3Q0EEE2 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ptchd3Q0EEE2 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ptchd3Q0EEE2 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Ptchd3Q0EEE2 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ptchd3Q0EEE2 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Ptchd3Q0EEE2 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ptchd3Q0EEE2 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Ptchd3Q0EEE2 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ptchd3Q0EEE2 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ptchd3Q0EEE2 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms