Protein–RNA interactions for Protein: Q04519

Smpd1, Sphingomyelin phosphodiesterase, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smpd1Q04519 Gm18025-201ENSMUST00000221733 862 ntBASIC19.43■□□□□ 0.7
Smpd1Q04519 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smpd1Q04519 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smpd1Q04519 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smpd1Q04519 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smpd1Q04519 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smpd1Q04519 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smpd1Q04519 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Smpd1Q04519 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smpd1Q04519 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Smpd1Q04519 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.42■□□□□ 0.7
Smpd1Q04519 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Smpd1Q04519 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smpd1Q04519 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smpd1Q04519 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smpd1Q04519 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.42■□□□□ 0.7
Smpd1Q04519 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smpd1Q04519 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Smpd1Q04519 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Smpd1Q04519 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.41■□□□□ 0.7
Smpd1Q04519 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smpd1Q04519 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smpd1Q04519 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smpd1Q04519 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Smpd1Q04519 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smpd1Q04519 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Smpd1Q04519 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Smpd1Q04519 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Smpd1Q04519 Gm15375-201ENSMUST00000119510 849 ntBASIC19.41■□□□□ 0.7
Smpd1Q04519 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.41■□□□□ 0.7
Smpd1Q04519 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.41■□□□□ 0.7
Smpd1Q04519 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Smpd1Q04519 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Smpd1Q04519 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Smpd1Q04519 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.41■□□□□ 0.7
Smpd1Q04519 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.41■□□□□ 0.7
Smpd1Q04519 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smpd1Q04519 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smpd1Q04519 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smpd1Q04519 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Smpd1Q04519 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
Smpd1Q04519 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smpd1Q04519 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smpd1Q04519 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.4■□□□□ 0.7
Smpd1Q04519 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smpd1Q04519 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smpd1Q04519 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Smpd1Q04519 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
Smpd1Q04519 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Smpd1Q04519 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Smpd1Q04519 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smpd1Q04519 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.4■□□□□ 0.7
Smpd1Q04519 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Smpd1Q04519 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smpd1Q04519 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smpd1Q04519 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.39■□□□□ 0.69
Smpd1Q04519 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.39■□□□□ 0.69
Smpd1Q04519 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Smpd1Q04519 Gm37292-201ENSMUST00000192062 758 ntBASIC19.39■□□□□ 0.69
Smpd1Q04519 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.39■□□□□ 0.69
Smpd1Q04519 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.39■□□□□ 0.69
Smpd1Q04519 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smpd1Q04519 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smpd1Q04519 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Smpd1Q04519 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.39■□□□□ 0.69
Smpd1Q04519 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.39■□□□□ 0.69
Smpd1Q04519 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smpd1Q04519 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Smpd1Q04519 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smpd1Q04519 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smpd1Q04519 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smpd1Q04519 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smpd1Q04519 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Smpd1Q04519 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Smpd1Q04519 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.38■□□□□ 0.69
Smpd1Q04519 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smpd1Q04519 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Smpd1Q04519 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smpd1Q04519 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smpd1Q04519 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smpd1Q04519 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Smpd1Q04519 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smpd1Q04519 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.37■□□□□ 0.69
Smpd1Q04519 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Smpd1Q04519 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smpd1Q04519 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smpd1Q04519 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smpd1Q04519 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smpd1Q04519 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Smpd1Q04519 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Smpd1Q04519 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Smpd1Q04519 Gm5417-201ENSMUST00000079706 384 ntBASIC19.37■□□□□ 0.69
Smpd1Q04519 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.37■□□□□ 0.69
Smpd1Q04519 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smpd1Q04519 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smpd1Q04519 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smpd1Q04519 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Smpd1Q04519 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Smpd1Q04519 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smpd1Q04519 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms