Protein–RNA interactions for Protein: P97460

Npas2, Neuronal PAS domain-containing protein 2, mousemouse

Predictions only

Length 816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas2P97460 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Npas2P97460 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Npas2P97460 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Npas2P97460 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Npas2P97460 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Npas2P97460 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Npas2P97460 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Npas2P97460 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Npas2P97460 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Npas2P97460 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Npas2P97460 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.81■□□□□ 0.6
Npas2P97460 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Npas2P97460 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Npas2P97460 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Npas2P97460 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Npas2P97460 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Npas2P97460 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Npas2P97460 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.81■□□□□ 0.6
Npas2P97460 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Npas2P97460 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Npas2P97460 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Npas2P97460 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Npas2P97460 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.81■□□□□ 0.6
Npas2P97460 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Npas2P97460 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Npas2P97460 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Npas2P97460 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Npas2P97460 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Npas2P97460 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Npas2P97460 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Npas2P97460 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Npas2P97460 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Npas2P97460 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.8■□□□□ 0.6
Npas2P97460 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Npas2P97460 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Npas2P97460 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Npas2P97460 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Npas2P97460 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Npas2P97460 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Npas2P97460 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Npas2P97460 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Npas2P97460 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Npas2P97460 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Npas2P97460 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Npas2P97460 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Npas2P97460 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Npas2P97460 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Npas2P97460 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Npas2P97460 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Npas2P97460 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Npas2P97460 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Npas2P97460 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Npas2P97460 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.79■□□□□ 0.6
Npas2P97460 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Npas2P97460 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Npas2P97460 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Npas2P97460 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.79■□□□□ 0.6
Npas2P97460 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.79■□□□□ 0.6
Npas2P97460 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Npas2P97460 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Npas2P97460 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Npas2P97460 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Npas2P97460 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Npas2P97460 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Npas2P97460 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Npas2P97460 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.78■□□□□ 0.6
Npas2P97460 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Npas2P97460 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Npas2P97460 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Npas2P97460 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Npas2P97460 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Npas2P97460 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Npas2P97460 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Npas2P97460 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Npas2P97460 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Npas2P97460 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Npas2P97460 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Npas2P97460 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Npas2P97460 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Npas2P97460 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Npas2P97460 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Npas2P97460 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.76■□□□□ 0.59
Npas2P97460 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.76■□□□□ 0.59
Npas2P97460 Gm42778-201ENSMUST00000199644 553 ntBASIC18.76■□□□□ 0.59
Npas2P97460 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.76■□□□□ 0.59
Npas2P97460 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Npas2P97460 Gm10493-201ENSMUST00000097270 612 ntBASIC18.76■□□□□ 0.59
Npas2P97460 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Npas2P97460 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.76■□□□□ 0.59
Npas2P97460 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Npas2P97460 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Npas2P97460 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Npas2P97460 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Npas2P97460 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Npas2P97460 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Npas2P97460 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Npas2P97460 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Npas2P97460 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Npas2P97460 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Npas2P97460 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms