Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Hmgb1P63158 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hmgb1P63158 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Hmgb1P63158 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hmgb1P63158 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Hmgb1P63158 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Hmgb1P63158 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hmgb1P63158 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hmgb1P63158 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Hmgb1P63158 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hmgb1P63158 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hmgb1P63158 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Hmgb1P63158 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Hmgb1P63158 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
Hmgb1P63158 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hmgb1P63158 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hmgb1P63158 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
Hmgb1P63158 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
Hmgb1P63158 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hmgb1P63158 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC20.14■□□□□ 0.81
Hmgb1P63158 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Hmgb1P63158 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.14■□□□□ 0.81
Hmgb1P63158 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
Hmgb1P63158 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hmgb1P63158 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
Hmgb1P63158 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hmgb1P63158 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hmgb1P63158 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hmgb1P63158 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hmgb1P63158 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hmgb1P63158 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.13■□□□□ 0.81
Hmgb1P63158 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Hmgb1P63158 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Hmgb1P63158 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hmgb1P63158 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hmgb1P63158 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
Hmgb1P63158 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hmgb1P63158 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Hmgb1P63158 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hmgb1P63158 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.12■□□□□ 0.81
Hmgb1P63158 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Hmgb1P63158 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
Hmgb1P63158 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hmgb1P63158 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hmgb1P63158 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Hmgb1P63158 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hmgb1P63158 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Hmgb1P63158 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Hmgb1P63158 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hmgb1P63158 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Hmgb1P63158 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hmgb1P63158 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Hmgb1P63158 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hmgb1P63158 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Hmgb1P63158 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hmgb1P63158 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hmgb1P63158 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hmgb1P63158 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hmgb1P63158 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hmgb1P63158 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.11■□□□□ 0.81
Hmgb1P63158 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hmgb1P63158 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Hmgb1P63158 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hmgb1P63158 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hmgb1P63158 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hmgb1P63158 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hmgb1P63158 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Hmgb1P63158 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hmgb1P63158 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hmgb1P63158 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hmgb1P63158 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hmgb1P63158 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
Hmgb1P63158 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Hmgb1P63158 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hmgb1P63158 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
Hmgb1P63158 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hmgb1P63158 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hmgb1P63158 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hmgb1P63158 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hmgb1P63158 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hmgb1P63158 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Hmgb1P63158 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Hmgb1P63158 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Hmgb1P63158 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hmgb1P63158 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.08■□□□□ 0.81
Hmgb1P63158 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hmgb1P63158 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.81
Hmgb1P63158 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Hmgb1P63158 Gm42778-201ENSMUST00000199644 553 ntBASIC20.08■□□□□ 0.81
Hmgb1P63158 AC160393.1-201ENSMUST00000218378 1279 ntBASIC20.08■□□□□ 0.81
Hmgb1P63158 Gm10493-201ENSMUST00000097270 612 ntBASIC20.08■□□□□ 0.81
Hmgb1P63158 AC121961.1-201ENSMUST00000218594 1779 ntBASIC20.08■□□□□ 0.8
Hmgb1P63158 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hmgb1P63158 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hmgb1P63158 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hmgb1P63158 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hmgb1P63158 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hmgb1P63158 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hmgb1P63158 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Hmgb1P63158 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms