Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.03■□□□□ 0.48
Lhx1P63006 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lhx1P63006 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Lhx1P63006 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Lhx1P63006 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lhx1P63006 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lhx1P63006 Gm13168-201ENSMUST00000121771 632 ntBASIC18.02■□□□□ 0.48
Lhx1P63006 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.02■□□□□ 0.48
Lhx1P63006 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.02■□□□□ 0.48
Lhx1P63006 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lhx1P63006 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Lhx1P63006 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Lhx1P63006 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Lhx1P63006 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Lhx1P63006 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Lhx1P63006 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Lhx1P63006 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lhx1P63006 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lhx1P63006 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Lhx1P63006 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lhx1P63006 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lhx1P63006 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Lhx1P63006 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lhx1P63006 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Lhx1P63006 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Lhx1P63006 Gm22240-201ENSMUST00000175225 82 ntBASIC18.01■□□□□ 0.47
Lhx1P63006 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lhx1P63006 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lhx1P63006 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lhx1P63006 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lhx1P63006 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lhx1P63006 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Lhx1P63006 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lhx1P63006 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
Lhx1P63006 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Lhx1P63006 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Lhx1P63006 Gm45906-201ENSMUST00000208911 1430 ntBASIC18■□□□□ 0.47
Lhx1P63006 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18■□□□□ 0.47
Lhx1P63006 Rncr4-201ENSMUST00000194541 2234 ntBASIC18■□□□□ 0.47
Lhx1P63006 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lhx1P63006 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lhx1P63006 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Lhx1P63006 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lhx1P63006 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lhx1P63006 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lhx1P63006 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lhx1P63006 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lhx1P63006 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lhx1P63006 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lhx1P63006 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lhx1P63006 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lhx1P63006 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Lhx1P63006 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lhx1P63006 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.99■□□□□ 0.47
Lhx1P63006 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Lhx1P63006 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lhx1P63006 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lhx1P63006 Gm11249-201ENSMUST00000117071 859 ntBASIC17.99■□□□□ 0.47
Lhx1P63006 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Lhx1P63006 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lhx1P63006 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lhx1P63006 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.99■□□□□ 0.47
Lhx1P63006 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lhx1P63006 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lhx1P63006 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lhx1P63006 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lhx1P63006 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lhx1P63006 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Lhx1P63006 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Lhx1P63006 Gm18666-201ENSMUST00000190039 958 ntBASIC17.98■□□□□ 0.47
Lhx1P63006 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lhx1P63006 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lhx1P63006 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lhx1P63006 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.98■□□□□ 0.47
Lhx1P63006 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lhx1P63006 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.98■□□□□ 0.47
Lhx1P63006 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lhx1P63006 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lhx1P63006 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lhx1P63006 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lhx1P63006 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.97■□□□□ 0.47
Lhx1P63006 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lhx1P63006 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lhx1P63006 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.97■□□□□ 0.47
Lhx1P63006 Gm11927-201ENSMUST00000118472 759 ntBASIC17.97■□□□□ 0.47
Lhx1P63006 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lhx1P63006 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Lhx1P63006 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lhx1P63006 Zfp783-201ENSMUST00000095946 670 ntBASIC17.97■□□□□ 0.47
Lhx1P63006 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lhx1P63006 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lhx1P63006 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lhx1P63006 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lhx1P63006 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lhx1P63006 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Lhx1P63006 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lhx1P63006 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.96■□□□□ 0.47
Lhx1P63006 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lhx1P63006 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Lhx1P63006 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms