Protein–RNA interactions for Protein: P62962

Pfn1, Profilin-1, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfn1P62962 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pfn1P62962 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Pfn1P62962 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pfn1P62962 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pfn1P62962 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pfn1P62962 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pfn1P62962 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Pfn1P62962 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pfn1P62962 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pfn1P62962 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC14.23□□□□□ -0.13
Pfn1P62962 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Pfn1P62962 Gm43759-201ENSMUST00000196925 1261 ntBASIC14.23□□□□□ -0.13
Pfn1P62962 AC154266.1-201ENSMUST00000223190 503 ntBASIC14.23□□□□□ -0.13
Pfn1P62962 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pfn1P62962 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pfn1P62962 AC122335.2-201ENSMUST00000213901 6181 ntBASIC14.23□□□□□ -0.13
Pfn1P62962 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pfn1P62962 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pfn1P62962 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pfn1P62962 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pfn1P62962 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pfn1P62962 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfn1P62962 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfn1P62962 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.22□□□□□ -0.13
Pfn1P62962 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfn1P62962 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfn1P62962 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfn1P62962 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfn1P62962 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pfn1P62962 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfn1P62962 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfn1P62962 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfn1P62962 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Pfn1P62962 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pfn1P62962 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC14.22□□□□□ -0.13
Pfn1P62962 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfn1P62962 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfn1P62962 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Pfn1P62962 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pfn1P62962 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfn1P62962 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfn1P62962 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pfn1P62962 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pfn1P62962 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Pfn1P62962 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfn1P62962 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfn1P62962 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfn1P62962 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfn1P62962 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pfn1P62962 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Pfn1P62962 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pfn1P62962 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Pfn1P62962 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pfn1P62962 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pfn1P62962 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC14.21□□□□□ -0.13
Pfn1P62962 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pfn1P62962 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pfn1P62962 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pfn1P62962 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pfn1P62962 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pfn1P62962 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Pfn1P62962 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pfn1P62962 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Pfn1P62962 Gm8770-201ENSMUST00000121113 1109 ntBASIC14.2□□□□□ -0.14
Pfn1P62962 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC14.2□□□□□ -0.14
Pfn1P62962 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pfn1P62962 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Pfn1P62962 Gm5522-201ENSMUST00000189483 1242 ntBASIC14.2□□□□□ -0.14
Pfn1P62962 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC14.2□□□□□ -0.14
Pfn1P62962 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pfn1P62962 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pfn1P62962 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Pfn1P62962 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pfn1P62962 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pfn1P62962 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pfn1P62962 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Pfn1P62962 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pfn1P62962 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pfn1P62962 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Pfn1P62962 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pfn1P62962 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Pfn1P62962 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pfn1P62962 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pfn1P62962 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pfn1P62962 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pfn1P62962 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pfn1P62962 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pfn1P62962 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Pfn1P62962 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pfn1P62962 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pfn1P62962 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pfn1P62962 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pfn1P62962 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pfn1P62962 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pfn1P62962 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pfn1P62962 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pfn1P62962 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Pfn1P62962 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pfn1P62962 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pfn1P62962 Gm45906-201ENSMUST00000208911 1430 ntBASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms