Protein–RNA interactions for Protein: P53668

Limk1, LIM domain kinase 1, mousemouse

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk1P53668 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
Limk1P53668 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Limk1P53668 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Limk1P53668 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Limk1P53668 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Limk1P53668 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Limk1P53668 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Limk1P53668 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.92■□□□□ 0.46
Limk1P53668 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Limk1P53668 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Limk1P53668 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Limk1P53668 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Limk1P53668 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Limk1P53668 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Limk1P53668 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Limk1P53668 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.91■□□□□ 0.46
Limk1P53668 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Limk1P53668 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Limk1P53668 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Limk1P53668 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17.91■□□□□ 0.46
Limk1P53668 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Limk1P53668 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Limk1P53668 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Limk1P53668 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
Limk1P53668 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.91■□□□□ 0.46
Limk1P53668 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Limk1P53668 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Limk1P53668 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.9■□□□□ 0.46
Limk1P53668 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Limk1P53668 Gm13559-201ENSMUST00000120476 863 ntBASIC17.9■□□□□ 0.46
Limk1P53668 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Limk1P53668 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Limk1P53668 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Limk1P53668 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.9■□□□□ 0.46
Limk1P53668 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
Limk1P53668 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Limk1P53668 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
Limk1P53668 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.9■□□□□ 0.46
Limk1P53668 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Limk1P53668 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Limk1P53668 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Limk1P53668 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
Limk1P53668 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Limk1P53668 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Limk1P53668 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Limk1P53668 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.89■□□□□ 0.45
Limk1P53668 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Limk1P53668 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Limk1P53668 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Limk1P53668 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Limk1P53668 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Limk1P53668 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Limk1P53668 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Limk1P53668 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.89■□□□□ 0.45
Limk1P53668 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Limk1P53668 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Limk1P53668 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Limk1P53668 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Limk1P53668 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Limk1P53668 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Limk1P53668 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Limk1P53668 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Limk1P53668 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
Limk1P53668 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Limk1P53668 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.88■□□□□ 0.45
Limk1P53668 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.88■□□□□ 0.45
Limk1P53668 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Limk1P53668 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Limk1P53668 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Limk1P53668 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Limk1P53668 Flg-201ENSMUST00000050758 1488 ntBASIC17.88■□□□□ 0.45
Limk1P53668 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Limk1P53668 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Limk1P53668 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Limk1P53668 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Limk1P53668 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Limk1P53668 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.87■□□□□ 0.45
Limk1P53668 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Limk1P53668 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Limk1P53668 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Limk1P53668 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Limk1P53668 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Limk1P53668 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.87■□□□□ 0.45
Limk1P53668 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Limk1P53668 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Limk1P53668 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Limk1P53668 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Limk1P53668 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Limk1P53668 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Limk1P53668 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Limk1P53668 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Limk1P53668 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Limk1P53668 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Limk1P53668 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Limk1P53668 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Limk1P53668 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Limk1P53668 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Limk1P53668 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Limk1P53668 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Limk1P53668 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms