Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lbx1P52955 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Lbx1P52955 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.74■□□□□ 0.43
Lbx1P52955 Gm13884-201ENSMUST00000118103 829 ntBASIC17.74■□□□□ 0.43
Lbx1P52955 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.74■□□□□ 0.43
Lbx1P52955 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.74■□□□□ 0.43
Lbx1P52955 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.74■□□□□ 0.43
Lbx1P52955 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lbx1P52955 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Lbx1P52955 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lbx1P52955 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lbx1P52955 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Lbx1P52955 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17.73■□□□□ 0.43
Lbx1P52955 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Lbx1P52955 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.73■□□□□ 0.43
Lbx1P52955 Gm7370-201ENSMUST00000219471 767 ntBASIC17.73■□□□□ 0.43
Lbx1P52955 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lbx1P52955 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lbx1P52955 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lbx1P52955 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.73■□□□□ 0.43
Lbx1P52955 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lbx1P52955 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lbx1P52955 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.72■□□□□ 0.43
Lbx1P52955 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.72■□□□□ 0.43
Lbx1P52955 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Lbx1P52955 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lbx1P52955 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Lbx1P52955 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lbx1P52955 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.72■□□□□ 0.43
Lbx1P52955 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Lbx1P52955 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.72■□□□□ 0.43
Lbx1P52955 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lbx1P52955 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lbx1P52955 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Lbx1P52955 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Lbx1P52955 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lbx1P52955 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lbx1P52955 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lbx1P52955 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lbx1P52955 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lbx1P52955 Gm12085-201ENSMUST00000119263 940 ntBASIC17.71■□□□□ 0.43
Lbx1P52955 Gm9013-201ENSMUST00000132939 882 ntBASIC17.71■□□□□ 0.43
Lbx1P52955 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lbx1P52955 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.71■□□□□ 0.43
Lbx1P52955 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.71■□□□□ 0.43
Lbx1P52955 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.71■□□□□ 0.43
Lbx1P52955 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.43
Lbx1P52955 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Lbx1P52955 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lbx1P52955 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lbx1P52955 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lbx1P52955 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lbx1P52955 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
Lbx1P52955 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Lbx1P52955 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lbx1P52955 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.7■□□□□ 0.42
Lbx1P52955 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lbx1P52955 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Lbx1P52955 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.7■□□□□ 0.42
Lbx1P52955 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.7■□□□□ 0.42
Lbx1P52955 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Lbx1P52955 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17.7■□□□□ 0.42
Lbx1P52955 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.7■□□□□ 0.42
Lbx1P52955 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
Lbx1P52955 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lbx1P52955 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Lbx1P52955 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.7■□□□□ 0.42
Lbx1P52955 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.7■□□□□ 0.42
Lbx1P52955 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lbx1P52955 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lbx1P52955 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Lbx1P52955 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Lbx1P52955 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lbx1P52955 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lbx1P52955 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.69■□□□□ 0.42
Lbx1P52955 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lbx1P52955 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Lbx1P52955 Gm11594-201ENSMUST00000122313 162 ntBASIC17.69■□□□□ 0.42
Lbx1P52955 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Lbx1P52955 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Lbx1P52955 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
Lbx1P52955 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
Lbx1P52955 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.69■□□□□ 0.42
Lbx1P52955 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lbx1P52955 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lbx1P52955 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Lbx1P52955 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Lbx1P52955 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lbx1P52955 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lbx1P52955 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Lbx1P52955 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Lbx1P52955 Gm2213-201ENSMUST00000197485 688 ntBASIC17.68■□□□□ 0.42
Lbx1P52955 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.68■□□□□ 0.42
Lbx1P52955 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lbx1P52955 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lbx1P52955 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lbx1P52955 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lbx1P52955 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lbx1P52955 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Lbx1P52955 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms