Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.14■□□□□ 0.49
Pdx1P52946 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pdx1P52946 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pdx1P52946 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Pdx1P52946 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.13■□□□□ 0.49
Pdx1P52946 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pdx1P52946 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
Pdx1P52946 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pdx1P52946 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Pdx1P52946 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.13■□□□□ 0.49
Pdx1P52946 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pdx1P52946 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Pdx1P52946 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pdx1P52946 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pdx1P52946 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pdx1P52946 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Pdx1P52946 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Pdx1P52946 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pdx1P52946 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Pdx1P52946 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Pdx1P52946 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.12■□□□□ 0.49
Pdx1P52946 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Pdx1P52946 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pdx1P52946 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Pdx1P52946 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pdx1P52946 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pdx1P52946 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pdx1P52946 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pdx1P52946 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pdx1P52946 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pdx1P52946 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pdx1P52946 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pdx1P52946 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pdx1P52946 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.11■□□□□ 0.49
Pdx1P52946 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pdx1P52946 Gm10602-201ENSMUST00000098239 609 ntBASIC18.11■□□□□ 0.49
Pdx1P52946 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pdx1P52946 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pdx1P52946 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pdx1P52946 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Pdx1P52946 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pdx1P52946 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pdx1P52946 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pdx1P52946 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Pdx1P52946 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pdx1P52946 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Pdx1P52946 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pdx1P52946 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pdx1P52946 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Pdx1P52946 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pdx1P52946 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pdx1P52946 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pdx1P52946 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.09■□□□□ 0.49
Pdx1P52946 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pdx1P52946 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pdx1P52946 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pdx1P52946 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Pdx1P52946 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pdx1P52946 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pdx1P52946 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pdx1P52946 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pdx1P52946 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pdx1P52946 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pdx1P52946 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pdx1P52946 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pdx1P52946 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Pdx1P52946 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.08■□□□□ 0.49
Pdx1P52946 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pdx1P52946 Gm26524-201ENSMUST00000192339 390 ntBASIC18.08■□□□□ 0.48
Pdx1P52946 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pdx1P52946 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pdx1P52946 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pdx1P52946 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pdx1P52946 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pdx1P52946 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pdx1P52946 Gm29257-201ENSMUST00000186115 639 ntBASIC18.07■□□□□ 0.48
Pdx1P52946 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Pdx1P52946 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pdx1P52946 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pdx1P52946 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Pdx1P52946 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pdx1P52946 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Pdx1P52946 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pdx1P52946 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.07■□□□□ 0.48
Pdx1P52946 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pdx1P52946 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pdx1P52946 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.06■□□□□ 0.48
Pdx1P52946 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pdx1P52946 Gm22325-201ENSMUST00000158904 308 ntBASIC18.06■□□□□ 0.48
Pdx1P52946 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.06■□□□□ 0.48
Pdx1P52946 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Pdx1P52946 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.06■□□□□ 0.48
Pdx1P52946 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pdx1P52946 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pdx1P52946 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pdx1P52946 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pdx1P52946 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Pdx1P52946 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.05■□□□□ 0.48
Pdx1P52946 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pdx1P52946 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms