Protein–RNA interactions for Protein: P50516

Atp6v1a, V-type proton ATPase catalytic subunit A, mousemouse

Known RBP Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1aP50516 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC22.07■■□□□ 1.12
Atp6v1aP50516 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC22.07■■□□□ 1.12
Atp6v1aP50516 Gm11539-201ENSMUST00000119837 557 ntBASIC22.07■■□□□ 1.12
Atp6v1aP50516 Gm13436-201ENSMUST00000120418 567 ntBASIC22.07■■□□□ 1.12
Atp6v1aP50516 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Atp6v1aP50516 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC22.07■■□□□ 1.12
Atp6v1aP50516 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Atp6v1aP50516 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Atp6v1aP50516 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC22.07■■□□□ 1.12
Atp6v1aP50516 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Atp6v1aP50516 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Atp6v1aP50516 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Atp6v1aP50516 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Atp6v1aP50516 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Atp6v1aP50516 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Atp6v1aP50516 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Atp6v1aP50516 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Atp6v1aP50516 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Atp6v1aP50516 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Atp6v1aP50516 Gm38285-201ENSMUST00000192928 922 ntBASIC22.05■■□□□ 1.12
Atp6v1aP50516 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Atp6v1aP50516 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
Atp6v1aP50516 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Atp6v1aP50516 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Atp6v1aP50516 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Atp6v1aP50516 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Atp6v1aP50516 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Atp6v1aP50516 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC22.04■■□□□ 1.12
Atp6v1aP50516 Otx2os1-204ENSMUST00000227221 751 ntBASIC22.04■■□□□ 1.12
Atp6v1aP50516 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Atp6v1aP50516 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Atp6v1aP50516 Gm7712-202ENSMUST00000222331 1510 ntBASIC22.04■■□□□ 1.12
Atp6v1aP50516 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Atp6v1aP50516 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Atp6v1aP50516 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Atp6v1aP50516 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Atp6v1aP50516 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Atp6v1aP50516 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Atp6v1aP50516 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Atp6v1aP50516 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Atp6v1aP50516 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC22.03■■□□□ 1.12
Atp6v1aP50516 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Atp6v1aP50516 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Atp6v1aP50516 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Atp6v1aP50516 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC22.03■■□□□ 1.12
Atp6v1aP50516 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Atp6v1aP50516 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Atp6v1aP50516 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Atp6v1aP50516 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Atp6v1aP50516 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Atp6v1aP50516 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Atp6v1aP50516 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Atp6v1aP50516 Odf3b-204ENSMUST00000227834 930 ntBASIC22.02■■□□□ 1.12
Atp6v1aP50516 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Atp6v1aP50516 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Atp6v1aP50516 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC22.02■■□□□ 1.12
Atp6v1aP50516 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Atp6v1aP50516 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
Atp6v1aP50516 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Atp6v1aP50516 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
Atp6v1aP50516 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC22.02■■□□□ 1.12
Atp6v1aP50516 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC22.02■■□□□ 1.11
Atp6v1aP50516 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
Atp6v1aP50516 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Atp6v1aP50516 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Atp6v1aP50516 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Atp6v1aP50516 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC22.01■■□□□ 1.11
Atp6v1aP50516 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Atp6v1aP50516 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Atp6v1aP50516 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Atp6v1aP50516 Gm7889-201ENSMUST00000185591 958 ntBASIC22.01■■□□□ 1.11
Atp6v1aP50516 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC22.01■■□□□ 1.11
Atp6v1aP50516 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC22.01■■□□□ 1.11
Atp6v1aP50516 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC22.01■■□□□ 1.11
Atp6v1aP50516 Timm23-208ENSMUST00000226683 750 ntBASIC22.01■■□□□ 1.11
Atp6v1aP50516 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Atp6v1aP50516 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Atp6v1aP50516 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Atp6v1aP50516 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Atp6v1aP50516 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC22■■□□□ 1.11
Atp6v1aP50516 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Atp6v1aP50516 Gm21362-201ENSMUST00000194272 928 ntBASIC22■■□□□ 1.11
Atp6v1aP50516 Gm3375-201ENSMUST00000203929 796 ntBASIC22■■□□□ 1.11
Atp6v1aP50516 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Atp6v1aP50516 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Atp6v1aP50516 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Atp6v1aP50516 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Atp6v1aP50516 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Atp6v1aP50516 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Atp6v1aP50516 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Atp6v1aP50516 Gm12382-201ENSMUST00000122005 922 ntBASIC21.99■■□□□ 1.11
Atp6v1aP50516 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Atp6v1aP50516 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Atp6v1aP50516 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC21.99■■□□□ 1.11
Atp6v1aP50516 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Atp6v1aP50516 Gm10819-201ENSMUST00000099988 561 ntBASIC21.99■■□□□ 1.11
Atp6v1aP50516 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Atp6v1aP50516 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Atp6v1aP50516 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Atp6v1aP50516 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms